Transcript Information: R_Transcript_489566.p1


Annotated TAIR IDAT3G49601.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf21 (InterPro:IPR013170); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18387504-18389279 | Reverse length=591
E-Value9E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20058198851339
Replicate 20.46145715200655
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_489566.p1 GENE.R_Transcript_489566~~R_Transcript_489566.p1 ORF type:internal len:91 (+),score=16.54,cwf21|PF08312.8|5.8e-07 R_Transcript_489566:2-271(+)
ACACCAAGGGGTTCCGGGACCAATGGTTTTATTCAACGCAATCTGGGATTTAGAGTTCAAAATGCAAAACCTTCAGAAGAAGCTTTCAAAGACCTTGAAACCAAACCCCCGGTCCAAAGAAAACCAAATCAAGAATTAATTGAACACCAAAAAAAAAGACAAATAGAAGTGAAAGTTACTGAATGGGCAGTGTCAACTGGTATTTTTGATTCGGGGTTAAGTGAAGAGGAAATTCAACAAAAACTACAAAATAAAAGGGAAGAACTTCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_489566.p1 GENE.R_Transcript_489566~~R_Transcript_489566.p1 ORF type:internal len:91 (+),score=16.54,cwf21|PF08312.8|5.8e-07 R_Transcript_489566:2-271(+)
TPRGSGTNGFIQRNLGFRVQNAKPSEEAFKDLETKPPVQRKPNQELIEHQKKRQIEVKVTEWAVSTGIFDSGLSEEEIQQKLQNKREELQ

Click here to download the sequence:
Link to NCBI Protein BLAST