Transcript Information: R_Transcript_48958.p1


Annotated TAIR IDAT2G37290.2
Annotated Gene NameYpt/Rab-GAP domain of gyp1p superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15656935-15661335 | Reverse length=916
E-Value9.1E-264
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.448103077844
Replicate 28.1638978813656
Replicate 310.212696009231
Condition 2: 8 Hour
Replicate 17.9013680502513
Replicate 27.8785775244314
Replicate 39.1275487840258
Condition 3: 24 Hour
Replicate 19.4763126755175
Replicate 210.059411124551
Replicate 39.9829895949361


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48958.p1 GENE.R_Transcript_48958~~R_Transcript_48958.p1 ORF type:complete len:877 (+),score=200.31,RabGAP-TBC|PF00566.14|1.7e-54 R_Transcript_48958:466-3096(+)
ATGGCGGACCAGAATTTGATTTCTCTATCCAACGCTGAGGCCAAAAGGGACTCTTATGGATTCACTGTAAGACCACAACACCTTCAGAGATACAGGGAGTACGGTAACATTTATAAGGAAGAAGAGGAAGAAAGATCTGAAAAGTGGAAGAACTTTCTAGAACAGTGCTCAGAATCTTCTCAGCTGTGTACACCCGCATTCGAGAACTTGGAATCATCAAAAGCAGAAGCTAGCGCAGGGCATACTGAAGCTATCAAAGAGAGTCCTGGGCAAGGGGATGAAACTAGCAGTGACAAGTGTAGACCTGAGGGTGGGGCAGAAGTTGAAATTAAAACAGAGGTTCAAGGGGTCAAAGATACAAAACGCTCTAAGATTCAAACTTGGGCACCAATTAGACTATCACTTGCTGCGATTGAGAAAATGATGAGTGTTCGTGTGAAGAAGAAAGTCTGCCTCGCAAATGAACACACTCTTTTAATGCAAAAAAATCAGCCACCAATTGACGCAGAGAAGAGTGGGAGGAAGAACTCCAGGGAGCACCTTGAGGAGTGTTTGCCAAACAGCGAGGTTGTATCAGAGGAGAGTAATTTAGATCCTGAAGCACTAGATGATTCTGCTGAAAGTAAGAACACCTCAAATGATTCTCACAAAACAAGGGAAATCTCTATCATCCCTGGTCAGGAAAATGGCATACCTGTTAAGTACTCCCAAAATGATGCAACATTGAGTAGTTGGTCTCAAGACAAGGCTGAAAATGATGGAAAGGAAGAATATGCTATTGATCATTTTGTGACTACCGGAACTTTCTTCCCGTGGAAAGAGGAATTCGAATCCCTTGTTCATGGAGGTGTACCAAAGTCTCTGAGGGGAGAGGTCTGGCAAGCTTTTGTTGGTGTGCGGGTGCGAAGGGTAGAGAGATATTATCAGGATTTGCTCTGTCAACAACTGGATTCTGGCAGTGATAGCAACAATCCATCCAGTGCCGGCAATAATGGGTCAACCTCATTTGCACCTGAGAAATGGAGAAAGCAGATAGAGAAGGATTTGCCTCGGACATTTCCTGGTCATCCTGCATTGGATGAGGAAGGCAGAAATTCCTTGCGCCGCATACTTACAGCATATGCTTTGCATAATCCCTCTGTTGGTTATTGTCAGGCCATGAATTTCTTTGCTGGCTTATTACTGCTTCTGATGCCAGAGGAGAATGCTTTTTGGACTTTGGTTGGTATTATTGATGGCTTCTTTGATGGATGTTATACACATGACATGATAGAGTCCCAGGTGGATCAGCTTGTTTTTGAGGATTTGATGCGTGAGAGATTTCCTAGGCTAGTTAATCACCTAGATTATTTGGGAGTAGAGGTGGCATGGATATCTGCTCCTTGGTTTCTTTCTATATTTGTGAACACGCTTCCATGGGAGAGCGTTCTACGCATTTGGGATGTTCTTCTCTTTGAAGGAAACCGTGTTATGTTGTTCCGCACCGCACTTGCCTTAATGGAGTTATATGGTCCTGCCCTAGTTACGACAAAGGATGCCGGGGATGCTGTCACCTTGTTGCAGTCTCTCATGGGATCGACATTTGATAGTAGCCAGCTAGTTCTTACTGCTTGTATGGGTTTTCTTGGTGTGACTGAAACCAGACTTGAAGAATTAAGGAGCAAACACCGACCTTCTATTCTGGGAATAGTCGAGGAAAGAACAAAAGGAACTGAGGTATCAAAGGAGTCTAAAAGTCTTGCATCCAAGTTGTATAGTTTCAAGCAGGATGCTCAGTCACTTATACATGAGCCAAATAAAAATAATGTTTTGTTTGGAAAGTCCAATGATTCAGCTATATCAACAGCCAAGTCTTCACCGGATACTTTTGATGAATTCATGTGTGACCTGAGTATTGATTCTGAGATCAATTCTCTCCCAGATCTTCAAGACCAGGTAGTTTGGTTGAAAGTTGAATTGTGCCGATTGATGGAGGAGAAAAGATCGGCAACTCTCAGAGCTGAAGAACTGGAGACAGCTTTCCTAGAGATGGTTAAGCAAGACAATCGACGGGAATTAAGTGCAAGGATTGAACAATTAGAGCAAGAGGTTGGTCTGCTTCGGCAAGCCCTTTCTGATAAGCAGGAACAAGAACGTGCAATGCTTGAGGTCCTCATGCGTGTTGAACAAGAGCAGAAGGTGACAGAAGATGCGCGAATTGCAGCAGAGCAAGATGTTGCTGCTCAGAAATATGCAGTTTTCGTGCTTCAGGAAAAATATGAGAAGGCTATGGCGTCATTGTCTGAGATGGAGAAAAGGGTGAAAATGGCAGAGTCAATGTTGGAGGCAACACTTCAGTATGAATGTGGTCAAGCAAAAGCAATTTCTTCTCCACGGTCCATGCGTACTGATTCACCACAACCAATAGGAAGGAGGACAGGTCTATTGTCCTTTGGACTTGGTTGGCGTGATAAAAATAAGGGAAGATCCGCTAATGAAGAGGATCTAGGGGACAGGAGGTCTACAGAAAATAGCAGCAGAGAAGACAAGAGAGAAAGCGATGGTGAGGAGCCAAAAGAAATGCAACCAACTGACGATAGTATCCTAAAGAGCTCCCAACTGACAGAAATCAATGGGCGTCACAGGCCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48958.p1 GENE.R_Transcript_48958~~R_Transcript_48958.p1 ORF type:complete len:877 (+),score=200.31,RabGAP-TBC|PF00566.14|1.7e-54 R_Transcript_48958:466-3096(+)
MADQNLISLSNAEAKRDSYGFTVRPQHLQRYREYGNIYKEEEEERSEKWKNFLEQCSESSQLCTPAFENLESSKAEASAGHTEAIKESPGQGDETSSDKCRPEGGAEVEIKTEVQGVKDTKRSKIQTWAPIRLSLAAIEKMMSVRVKKKVCLANEHTLLMQKNQPPIDAEKSGRKNSREHLEECLPNSEVVSEESNLDPEALDDSAESKNTSNDSHKTREISIIPGQENGIPVKYSQNDATLSSWSQDKAENDGKEEYAIDHFVTTGTFFPWKEEFESLVHGGVPKSLRGEVWQAFVGVRVRRVERYYQDLLCQQLDSGSDSNNPSSAGNNGSTSFAPEKWRKQIEKDLPRTFPGHPALDEEGRNSLRRILTAYALHNPSVGYCQAMNFFAGLLLLLMPEENAFWTLVGIIDGFFDGCYTHDMIESQVDQLVFEDLMRERFPRLVNHLDYLGVEVAWISAPWFLSIFVNTLPWESVLRIWDVLLFEGNRVMLFRTALALMELYGPALVTTKDAGDAVTLLQSLMGSTFDSSQLVLTACMGFLGVTETRLEELRSKHRPSILGIVEERTKGTEVSKESKSLASKLYSFKQDAQSLIHEPNKNNVLFGKSNDSAISTAKSSPDTFDEFMCDLSIDSEINSLPDLQDQVVWLKVELCRLMEEKRSATLRAEELETAFLEMVKQDNRRELSARIEQLEQEVGLLRQALSDKQEQERAMLEVLMRVEQEQKVTEDARIAAEQDVAAQKYAVFVLQEKYEKAMASLSEMEKRVKMAESMLEATLQYECGQAKAISSPRSMRTDSPQPIGRRTGLLSFGLGWRDKNKGRSANEEDLGDRRSTENSSREDKRESDGEEPKEMQPTDDSILKSSQLTEINGRHRP*

Click here to download the sequence:
Link to NCBI Protein BLAST