Transcript Information: R_Transcript_4900.p1


Annotated TAIR IDAT5G20730.1
Annotated Gene NameTranscriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related
Annotated Gene Symbol(s)NPH4, MSG1, IAA21, ARF7, TIR5, BIP
Annotation TypeHomolog
Chromosome Positionchr5:7016704-7021504 | Reverse length=1165
E-Value2E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.559831617277
Replicate 212.591239346222
Replicate 318.839186060387
Condition 2: 8 Hour
Replicate 120.938847127784
Replicate 228.351647692718
Replicate 335.115732695515
Condition 3: 24 Hour
Replicate 127.105946851401
Replicate 221.024639316251
Replicate 325.399283476228


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4900.p1 GENE.R_Transcript_4900~~R_Transcript_4900.p1 ORF type:complete len:642 (+),score=165.52,AUX_IAA|PF02309.12|1.6e+04,AUX_IAA|PF02309.12|1.6e+04,AUX_IAA|PF02309.12|1.6e-08 R_Transcript_4900:243-1928(+)
ATGCCTCAATCAACCTTTGTAAATAGTGGTCTCGTCTCGCCTAACCAGAACCTGAGTCAGAGTATGCAGCAGCCCCCTGCGTACTCTCAGCCTCTCCAGCAGCAATTGCTGGCAGGAAATAACCAGGCCCTACAAAACCTCCCCACAAGCAAAGATTCTGTTCCGATAGTGTCCTTACCTCCAGATATGCAGTTTCAGCAGCAAGCGGAACAGCAAGGTATCGTTCTTCAGCGGCTTCAGCAGCAGCAGCAGTCAACACAGTTGCAACCATCATCGCAACAGTTGCTTCAAGAGAGCATATCACAGAGGCCGTCTGTTATGCAGAGCCTCTCCGAACATCAGCTCCAAGTGCAGCTGCTCCAAAAATTACAGCAGCAACAACAGTCTCAGACTCTGCCTCAGCAACTGCAACCACAGATGCAGCAGCAACAACAGCAACAGCAATCACAATCACATCAATTGCTGTCTCCTGTTAGCACTCATGTCCAACCTCAAGCAACAACCCAACAAGTTGCTCCCCAACAAAACCCAATGTTCCAACAGCGTCCTTTACCTCACTTTCAGTCACAACAAGTGGGTGTAAGCTCCGTTTCAACGCCATCATTTATGACTCCGCAGGTTCCACCTGTCCAGCTCCAAGGATTGCAGAAAACAGTTCCCTTGGTAAGATCTCAATCTGGCCCGACAGATGGAGATCCTCCATCGTGTTCGACATCACCTTCGACAAATAATTGTCAGATTCCCCCTTCTAGCTTCTTAAACCGCAGCCAGACAGCAAGAAACATGCTAGTTGATCATTCAATTGTTGAACCCAATGGTCATTTGGTTCAAGATCCTCTAGAGAAATCCGACATTAGGATCAAGCATGAAATTCCCAGCTCAAAAGTAGTAGAACCGCCAAGATTCAATGGCACCATTACCGATCCACTGGAGGCATCCTCTTCTGTTATTTCGTATGGGTTGGATGCTAGTGGGCTTCAACAGAATCTATCGCTTCCCAGCTTTGGGTTGGATGGAGATGTACAGTCTCATCCAAGGAACGGTCTTCCTTTATCAACTACAATGGATGGTTTGACTCCTGATACTTTGTTGTCAAGGGGTTTTGACTCAGGAAAAGAGCTCCACAACTTGCTTAATTACCCTGGTGCTCCTCGGGATATTGAAACGGAATTGTCAGCTGCTGGTATGAGCTCTCAGTCATTTGGAATCTCAAATATGCCGTTCAAGACTGGATGCTCGAATGATGTTGCAATTAATGACCCTGCAGTTTTTGGTGGTGGGATGTGGCCCAGTCAGACTCAACGTATGAGGACATATACAAAGGTTCACAAGCGTGGCTCAGTTGGTAGATCCATTGATGTAACTCGTTACAAGGGCTATGATGAGCTTCGGCGTGATCTTGCTCGCATGTTTGGCATTGAAGGACAGCTGGAAGATCCTCAGAGGACAGATTGGAAACTCGTCTATGTTGATCATGAAAATGATATACTTCTAGTGGGCGACGATCCATGGGATGAATTCGTGAACTGTGTCCAAAGCATAAAGATACTATCATCTGTGGAGGTACAGCAGATGAGCTTGGATGGGGATTTGGGTAATGGACCAATCCCGAACCAAGCTTCCAGTGGGACGGACAGTGGCAATGCCTGGAGAGGGCACTACGACGATAGCTCCTCTTTCAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4900.p1 GENE.R_Transcript_4900~~R_Transcript_4900.p1 ORF type:complete len:642 (+),score=165.52,AUX_IAA|PF02309.12|1.6e+04,AUX_IAA|PF02309.12|1.6e+04,AUX_IAA|PF02309.12|1.6e-08 R_Transcript_4900:243-1928(+)
MPQSTFVNSGLVSPNQNLSQSMQQPPAYSQPLQQQLLAGNNQALQNLPTSKDSVPIVSLPPDMQFQQQAEQQGIVLQRLQQQQQSTQLQPSSQQLLQESISQRPSVMQSLSEHQLQVQLLQKLQQQQQSQTLPQQLQPQMQQQQQQQQSQSHQLLSPVSTHVQPQATTQQVAPQQNPMFQQRPLPHFQSQQVGVSSVSTPSFMTPQVPPVQLQGLQKTVPLVRSQSGPTDGDPPSCSTSPSTNNCQIPPSSFLNRSQTARNMLVDHSIVEPNGHLVQDPLEKSDIRIKHEIPSSKVVEPPRFNGTITDPLEASSSVISYGLDASGLQQNLSLPSFGLDGDVQSHPRNGLPLSTTMDGLTPDTLLSRGFDSGKELHNLLNYPGAPRDIETELSAAGMSSQSFGISNMPFKTGCSNDVAINDPAVFGGGMWPSQTQRMRTYTKVHKRGSVGRSIDVTRYKGYDELRRDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWDEFVNCVQSIKILSSVEVQQMSLDGDLGNGPIPNQASSGTDSGNAWRGHYDDSSSFN*

Click here to download the sequence:
Link to NCBI Protein BLAST