Transcript Information: R_Transcript_49094.p1


Annotated TAIR IDAT2G16250.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7039682-7042933 | Reverse length=915
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.067148421298
Replicate 28.6103249514205
Replicate 37.8867495670963
Condition 2: 8 Hour
Replicate 17.8666210850251
Replicate 28.4098492012354
Replicate 311.006404246792
Condition 3: 24 Hour
Replicate 18.5084855734254
Replicate 28.4883726651235
Replicate 38.0398915242441


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49094.p1 GENE.R_Transcript_49094~~R_Transcript_49094.p1 ORF type:complete len:912 (+),score=167.27,LRR_8|PF13855.2|8.7,LRR_8|PF13855.2|0.00026,LRR_8|PF13855.2|8.7e-09,LRR_8|PF13855.2|1.4e-10,LRR_8|PF13855.2|7.9e-08,LRR_8|PF13855.2|1.9e-05,LRR_8|PF13855.2|25,Pkinase_Tyr|PF07714.13|2e-19,Pkinase|PF00069.21|7.4e-18,LRR_4|PF12799.3|7.1e+03,LRR_4|PF12799.3|0.0083,LRR_4|PF12799.3|0.0013,LRR_4|PF12799.3|0.0052,LRR_4|PF12799.3|0.85,LRR_4|PF12799.3|0.89,LRR_4|PF12799.3|1e+04,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|73,LRR_1|PF00560.29|0.078,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|13,LRR_1|PF00560.29|41,LRR_1|PF00560.29|3.8e+02,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|7.6e+02,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|2.1e+03 R_Transcript_49094:776-3511(+)
ATGGATCAGTTTAGACAACCTAGTTGGGTGTTTTTGTTAGTGGGTGTGTTGTTGTTGTTGAGATTTAAGGCTACATTGGTTGTTGGTCAACAACAAAATGTTACTACTATAAGCTCTGAGAGATTTACACTGATTCAACTCAGATCCTCATTGGGACTAAGAGCAAAAGAATGGCCAATAAAAGGGGACCCATGTTTGGTATGGAAGGGAATTGGGTGTGTAAATGGTTCAGTTGTTGATATTAACATTTCAGGGTTTAGGAGGACTAGAATTGGGGCTCAAAACCCTCAATTTGCTGTTGATTCTCTTGCTAATTTGACCCATTTAGCTACTTTTAATGCCTCCTCTTTCTCCCTACCTGGTCAAATTCCTGATTGGTTTGGTCAACAATTGGGTAGTTTGAAAGTCCTTGATCTCAGTTCTTGTTCCATTGATGGTCCTATTCCTTTTAGTTTGGGCAACTTGAGTAGTTTAAGTACTTTGGTTCTTTCTCATAATGCTCTTAGTGGGATTGTCCCTCCTTCTTTGGGTCAGCTTGGGAGCCTCTCTATTCTCGATCTGTCCCAGAATTCCTTAACTGGGTCTATCCCAGATTCCTTTGCCTCCCTTAGGAACCTGTCGAAACTCGACCTTTCGTCGAATTTTCTCTCTGGGCCTATCCCTCCTGGCATTGGGATGTTGTCCAGTCTTAGGAGTTTGAATTTCTCTAACAATAGTCTTAATTCGGATATCCCCCCTCAACTTGGTGATCTTCGGGCCTTGGTTGACCTTGACCTTGGGTCTAATTCTCTGGTGAGTATATTGCCCCAGGACTTGAAAGGGTTGAGGAGTTTAAGGACCATGGTGCTTGGGGACAATAGACTTTCCGGTCTACTTCCTGATGATTTGTTCAGGGATTTGACCCAGTTGGAGGTTGTGGATTTTAGCCACAATAATTTTTCTGGTTCTGTTCCTAGTGCATTATGGTCAATGTCTACATTGCAGCTTGTTGATGTCTCCAGCAATAACTTTACTGGGTCTCTTCCAAAAGTTAGCTCAAATGCGAATACCACCACTGCAGTGTTTAATCTTTCCAATAACAATTACTATGGGGGAATCACAGATGTATTCCGAAGATTTGGCTTGATTGATGTATCAGGCAATTATTTTGAGGGCAAGGTGCCAGATTTTATGCGTGGTATTGCATCTCTTAGGGGTAACTGTCTCCAAGATGCCACGGATCAGAGGACTCAAGATGATTGTGCTTCATTTTATGACTCTCAAGGTTTGGTTTTTGACAATTTCGGCCATCCAATTACAAATTTGACACCCACTGCAGGACCATCACCATCAAAGAAGAGCCACAAGCGCACTATTATATTGGCTGCAGTTCTGGGGGGAGTTGGGCTTGTGCTATTGGTGCTTCTGCTTCTTTGTCTGATCCTATGCACCCAAAGGAGGGGAAGAACAAGACAAATAGGTAATGGTGTGGGACCAATTCCTGCTACTGGGCCTGGTCCACCTTCACCAGGTGTCGCGATTAATTTTGCAAGCTTGGGGGAAGCTTTTACATATCAGCAACTTCTCCAAGCTACAGGTGAATTTAGCGATGTGAACCTCATCAAAAATGGTCATTCTGGGGATTTTTTCCGGGGTATCCTGGAAGGTGGTATACCTGTGGTGGTCAAAAGAGTTAACTTGAATTCAGTAAAGCCGGAGTCGTACCTTGTAGAGTTGGATTTTTTCAGTAAAGTATCACATCCCAGATTGGTTCCTCTATTGGGATACTGCTTGGAGAAGGAGAATGAGAAGTATCTTGTTTACAAGAATATGCCAAATGGGGACTTGTCAAGTTCCTTGTACAGGAAGATCAATACAGATGACGATGGTTTGCAATCCCTGGATTGGATAACAAGATTGAAGATAGCAATAGGAGCAGCTGAGGGTCTGTCATACCTACATCATGAATGTGCTCCACCTTTTGTTCACAGGGACGTACAAGCAAGCAGTATACTACTTGATGATAAATTTGAAGTACGACTTGGCAGCCTAAGTGAGGTTTGTGTTCAAGAAGGTGATACCCAACCTGGAGTGATCACAAGATTTTTGCGTTTGCCACAGTCCTCTGAACAAGGGCCATCAGGCTCTCATACATCTACCTGTGCATATGATGTTTACTGCTTTGGGAAGGTGTTACTTGAGCTGGTGACTGGCAAGCTAGGCATTAGTGCGTCTAATGATGCCAGTGTGAAGGAGTGGTTGGATCAGACACTAAACTACATAAATATTTACGATAAGGAACTCGTAACGAAAATCGTGGACCCCTCATTGATATACGACGAGGACCTCTTGGAGGAAGTTTGGGCAATGGCCATAGTTGCCAGATCTTGTCTTAATCCAAAGCCTTCAAGGCGGCCCCTCATGAGATATATCCTAAAAGCACTCGAGAACCCGCTGAAGGTGGTGAGAGAAGAGAGTACTGGTTCTGCAAGGCTTAGGACAACTTCTTCGAGAGGCTCTTGGAATGCATCCGTATTTGGCAGCTGGAGGCAGAGCTTGGATGTGGCTGCTGCCCCTGCAACCTCTACTCCCCGAGAGGGAACTGGCAGCCTAAAACGGTCAGGAACTTCCGGGTCTCAGGGAAGCGGGCAAATTGGTGGTGGGAACGACCATTCATCCTCACAAAGGCGGCAATCCAGAGAGATATTCCCTGAACCACCAGATGTGCATGATTTAGAAAGACGAGGTGAAGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49094.p1 GENE.R_Transcript_49094~~R_Transcript_49094.p1 ORF type:complete len:912 (+),score=167.27,LRR_8|PF13855.2|8.7,LRR_8|PF13855.2|0.00026,LRR_8|PF13855.2|8.7e-09,LRR_8|PF13855.2|1.4e-10,LRR_8|PF13855.2|7.9e-08,LRR_8|PF13855.2|1.9e-05,LRR_8|PF13855.2|25,Pkinase_Tyr|PF07714.13|2e-19,Pkinase|PF00069.21|7.4e-18,LRR_4|PF12799.3|7.1e+03,LRR_4|PF12799.3|0.0083,LRR_4|PF12799.3|0.0013,LRR_4|PF12799.3|0.0052,LRR_4|PF12799.3|0.85,LRR_4|PF12799.3|0.89,LRR_4|PF12799.3|1e+04,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|73,LRR_1|PF00560.29|0.078,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|13,LRR_1|PF00560.29|41,LRR_1|PF00560.29|3.8e+02,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|7.6e+02,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|2.1e+03 R_Transcript_49094:776-3511(+)
MDQFRQPSWVFLLVGVLLLLRFKATLVVGQQQNVTTISSERFTLIQLRSSLGLRAKEWPIKGDPCLVWKGIGCVNGSVVDINISGFRRTRIGAQNPQFAVDSLANLTHLATFNASSFSLPGQIPDWFGQQLGSLKVLDLSSCSIDGPIPFSLGNLSSLSTLVLSHNALSGIVPPSLGQLGSLSILDLSQNSLTGSIPDSFASLRNLSKLDLSSNFLSGPIPPGIGMLSSLRSLNFSNNSLNSDIPPQLGDLRALVDLDLGSNSLVSILPQDLKGLRSLRTMVLGDNRLSGLLPDDLFRDLTQLEVVDFSHNNFSGSVPSALWSMSTLQLVDVSSNNFTGSLPKVSSNANTTTAVFNLSNNNYYGGITDVFRRFGLIDVSGNYFEGKVPDFMRGIASLRGNCLQDATDQRTQDDCASFYDSQGLVFDNFGHPITNLTPTAGPSPSKKSHKRTIILAAVLGGVGLVLLVLLLLCLILCTQRRGRTRQIGNGVGPIPATGPGPPSPGVAINFASLGEAFTYQQLLQATGEFSDVNLIKNGHSGDFFRGILEGGIPVVVKRVNLNSVKPESYLVELDFFSKVSHPRLVPLLGYCLEKENEKYLVYKNMPNGDLSSSLYRKINTDDDGLQSLDWITRLKIAIGAAEGLSYLHHECAPPFVHRDVQASSILLDDKFEVRLGSLSEVCVQEGDTQPGVITRFLRLPQSSEQGPSGSHTSTCAYDVYCFGKVLLELVTGKLGISASNDASVKEWLDQTLNYINIYDKELVTKIVDPSLIYDEDLLEEVWAMAIVARSCLNPKPSRRPLMRYILKALENPLKVVREESTGSARLRTTSSRGSWNASVFGSWRQSLDVAAAPATSTPREGTGSLKRSGTSGSQGSGQIGGGNDHSSSQRRQSREIFPEPPDVHDLERRGED*

Click here to download the sequence:
Link to NCBI Protein BLAST