Transcript Information: R_Transcript_49172.p1


Annotated TAIR IDAT3G52120.1
Annotated Gene NameSWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19329243-19331738 | Forward length=443
E-Value9E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6997948679005
Replicate 22.6329765795358
Replicate 31.1048265721617
Condition 2: 8 Hour
Replicate 13.6217034970202
Replicate 22.7321977812381
Replicate 31.4591326865263
Condition 3: 24 Hour
Replicate 11.6978442644283
Replicate 22.5530203217388
Replicate 33.8708159414127


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49172.p1 GENE.R_Transcript_49172~~R_Transcript_49172.p1 ORF type:complete len:311 (+),score=80.05,G-patch|PF01585.19|9.2e-13,Surp|PF01805.16|5.6e-11 R_Transcript_49172:2522-3454(+)
ATGGTCAAGAACTTTGCAGACAAGCTAGCTATTTTCATGGCTAAAAATGGAAGACAGATAGAGGATATTACACGCCAAAAGAACCCGGGAGACACTCCATTCAAATTTCTGTTTGACAATACTTGTGCAGAATACAAATATTATGAGTACCGGCTCCAAGAAGAGGAGAAGGCTCTTGCACAATCAAAGGATTTGCATAGTGCAAGACATGGTGGTAGCAGCAGTTCAACCGCTAGTTCTTCTCAGAGGTCCTATAAGCAGCAGCCAAATTATCAGACTGCTGCTTCAGCTTTATACAATATCAGCGAAGTGCAATCTGAACCAGGGAGGAGCGGGGATTCTGGTGTCCCAACAGATCCTGTAGCCATGATGGAGTACTATGCTAAAAAAGCAGCAGAGGAAGAGAGGAGGAGACCACCCAAACAGTCACAAGATGAAATGCCTCCCCCACCTTCTCTTCAAGCTCCAGTTAAAAAAGGTCATCACATGGGTGATTTCATACCACCAGAAGAGCTTGAGAAATTTTTGGCCAACTGTAACGATGCAGCCGCGCAGAGAGCTGCAAAAGAAGCCGCAGAGAAGGCAAGAATACAAGCAGACAACATTGGCCACAAACTTCTGTCAAAAATGGGTTGGAAAGAAGGTGAGGGTGTTGGGGGCTCAAGAAAGGGTATTGCAGATCCCATCATGGCAGGTGGTGTAAAATCAAACAATTTAGGAGTTGGTGCCCACCAACCTGGTGAAGTAACCCCTGATGATGATATATATGAGCAGTACAAGAAGCGGATGATGCTGGGTTATCGGTACAGACCCAATCCCCTGGTATGTGAACCTCTTTTAGACTTTCATCTTCTTGTTCCCACTTCCTCATGCCTTTTCCTCATTGTAGCACTTAAACCAGGGGACCAAATGGCGCTCTGGTCTGCAAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49172.p1 GENE.R_Transcript_49172~~R_Transcript_49172.p1 ORF type:complete len:311 (+),score=80.05,G-patch|PF01585.19|9.2e-13,Surp|PF01805.16|5.6e-11 R_Transcript_49172:2522-3454(+)
MVKNFADKLAIFMAKNGRQIEDITRQKNPGDTPFKFLFDNTCAEYKYYEYRLQEEEKALAQSKDLHSARHGGSSSSTASSSQRSYKQQPNYQTAASALYNISEVQSEPGRSGDSGVPTDPVAMMEYYAKKAAEEERRRPPKQSQDEMPPPPSLQAPVKKGHHMGDFIPPEELEKFLANCNDAAAQRAAKEAAEKARIQADNIGHKLLSKMGWKEGEGVGGSRKGIADPIMAGGVKSNNLGVGAHQPGEVTPDDDIYEQYKKRMMLGYRYRPNPLVCEPLLDFHLLVPTSSCLFLIVALKPGDQMALWSAK*

Click here to download the sequence:
Link to NCBI Protein BLAST