Transcript Information: R_Transcript_49239.p1


Annotated TAIR IDAT5G18420.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2363 (InterPro:IPR019312); Has 233 Blast hits to 233 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 2; Plants - 59; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6105638-6109337 | Reverse length=442
E-Value3.8E-181
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.055733764654
Replicate 225.18603836785
Replicate 325.607758809304
Condition 2: 8 Hour
Replicate 123.819582907864
Replicate 228.749705224382
Replicate 328.565119661108
Condition 3: 24 Hour
Replicate 128.996595523427
Replicate 225.606105560035
Replicate 328.637654431609


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49239.p1 GENE.R_Transcript_49239~~R_Transcript_49239.p1 ORF type:complete len:441 (+),score=67.36,DUF2363|PF10155.5|1.5e-54 R_Transcript_49239:171-1493(+)
ATGATCAACGTCGACGAATCGAAGGCGTTATTTGCGCTACTCAACGCCGAGCAAAGACCATTCGATGAAGTTATGGAGGATTTTATCTCTAATTTCCATTCTCCTCTCCATTTCAGATTCTGCTTTGCCCTCGCCACTCTCTTAGAGGACAAACCCATCCTTCTACCATATCAGCGCTTGTATGCAATTTGTATAATTTATCAGGCGTACTCTTCCCAACAACCTTCTGAAAATCCGTTTATCTCGCTTCTGGTGAATGCTGCATCTGATGAAGAAGGTGCAAAGTATGAGAGGGCTCTTATTCTCCAATTGTTGAGCACAGCTGGCAATGGAAGTAACAAAGAGGTTCTTAAACAATCTGCTGATGATTATATTAAAGGCGTTGATTCTTCATCCCTTGCTTTTCCAACTCGTGAACAGTTGCATGAGCAATTTTGCATTAAAGTTCGCCCACAGCCTTACAACTGCTTATTCAAGAACGCTTCTGTGAAAAATGTGATACCCGATCCGGATGTGCCTCCTCAATGTGACACAAGTTCGGCAGAATTTGACCTTCAACCTGGAGCCAAACCCAAAATTGGATCTGGAAATAGAGATGAGACAATAACTGGGTTGTTAGATAGCTTATCTCCAGAGGGACTAGGACCGAAATGGATCAGGCCTTTTCCACCAAGGATTTCAATTCAAGAAGGGGAGATGGTTTGGCTCCATCCTCACAATAAACATGAGCTTTTATGGGATTATGGCATGTGCGCGGATACAAGTAGAGGGGCAGCTGTGAGAGATCTGATTGCGAAGGCATTGAAAGGTCCACTTGCTCCTGCACAACAAGAGCAAGTCCTACTGGAGCTCGCAAATGATCCGAAGCTGGTTTACCATTGTGGATTGACACCAAGAAAACTTCCAGAGCTTGTGGAAAACAATCCTCTCATTGCAGTTGAAGTTCTTATCAAGCTGATGAATTCACCTGAAATTTCTGACTACTTTACAGTCTTGGTCAACATGGATATGAGTCTGCACTCTATGGAAGTTGTAAACAGGCTTACAACTGCAGTGGATCTTCCCACAGAATTTGTGCATATGTACATAACAAATTGCATAGCATCTTGTGAAAACATCAAGGACAAGTATATGCAGAACAGACTTGTCAGACTTGTATGTGTCTTCTTGCAGAGCTTAATACGCAACAAGATCATCAATGTTCAAGATCTCTTTATTGAAGTTCAAGCCTTCTGCATCGAGTTCTCCCGGATAAGGGAAGCTGCCGGATTATTCAGGTTACTCAAAACCTTGGAGTTTATACAGAACAGACAGTTTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49239.p1 GENE.R_Transcript_49239~~R_Transcript_49239.p1 ORF type:complete len:441 (+),score=67.36,DUF2363|PF10155.5|1.5e-54 R_Transcript_49239:171-1493(+)
MINVDESKALFALLNAEQRPFDEVMEDFISNFHSPLHFRFCFALATLLEDKPILLPYQRLYAICIIYQAYSSQQPSENPFISLLVNAASDEEGAKYERALILQLLSTAGNGSNKEVLKQSADDYIKGVDSSSLAFPTREQLHEQFCIKVRPQPYNCLFKNASVKNVIPDPDVPPQCDTSSAEFDLQPGAKPKIGSGNRDETITGLLDSLSPEGLGPKWIRPFPPRISIQEGEMVWLHPHNKHELLWDYGMCADTSRGAAVRDLIAKALKGPLAPAQQEQVLLELANDPKLVYHCGLTPRKLPELVENNPLIAVEVLIKLMNSPEISDYFTVLVNMDMSLHSMEVVNRLTTAVDLPTEFVHMYITNCIASCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLFIEVQAFCIEFSRIREAAGLFRLLKTLEFIQNRQFC*

Click here to download the sequence:
Link to NCBI Protein BLAST