Transcript Information: R_Transcript_49259.p1


Annotated TAIR IDAT5G35410.1
Annotated Gene NameProtein kinase superfamily protein
Annotated Gene Symbol(s)SOS2, SNRK3.11, CIPK24, ATSOS2
Annotation TypeOrtholog
Chromosome Positionchr5:13634933-13638062 | Forward length=446
E-Value4.3E-250
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 153.914582908101
Replicate 237.136628269355
Replicate 344.19890337936
Condition 2: 8 Hour
Replicate 137.753536262272
Replicate 249.05603152824
Replicate 354.2949057764
Condition 3: 24 Hour
Replicate 143.033246587613
Replicate 238.572413125811
Replicate 348.933965324231


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49259.p1 GENE.R_Transcript_49259~~R_Transcript_49259.p1 ORF type:complete len:454 (+),score=81.23,Pkinase|PF00069.21|1.1e-72,Pkinase_Tyr|PF07714.13|2.2e-35,NAF|PF03822.10|6.9e-20,Kinase-like|PF14531.2|1.1e+03,Kinase-like|PF14531.2|9.9e-08 R_Transcript_49259:393-1754(+)
ATGAGCGTTGGAGGAGGGAGAGAGAAAATGGTGACGACAAGGAGGGTAGGGAAGTATGAGATGGGAAGAACAATTGGTGAAGGAACTTTCGCGAAAGTGAAATTTGCTGTTAATAAAGAAACTGGAGAAAGTGTTGCCATGAAAGTTTTGGCTAAGAGTACTATTCTCAAGCACAAGATGGTTAATCAGATTAAACGTGAGATATCAATAATGAAGATTGTGCGACATCCATACATTGTAAGACTACATGAGGTTTTGGCTAGCCGGACCAAGATATACATAATTCTGGAGTTTGTACCTGGAGGGGAGCTATTTGATAAAATTGTTCACAAAGGCAAGCTCTCTGAGAGAGAATCTAGAAAATATTTTCAGCAGCTTATCGATGCAGTTGCTCATTGTCATGGAAAGGGTGTTTATCATAGAGATTTAAAGCCAGAAAACCTGCTTCTTGATGTGCATGGAAATTTGAAGGTTTCTGATTTTGGACTTAGTGCCTTACCAAAACAAGGAGTTGATCTTCTTCACACCACTTGTGGCACCCCTAATTATGTTGCACCTGAGGTTTTAAATAGCCAGGGATATGATGGTGCTGCTGCAGATATTTGGTCTTGTGGTGTTATCCTTTATGTTCTTATGGCTGGATATTTGCCGTTTGAGGAAACTGACCTTGCTACATTGTACAAAAAGATTAACTCTGCAGAATTTTCATGTCCATTTTGGTTCTCAGCGATTGCAAAGTCATTGATTGATAGGATACTTGACCCTAATCCTAAAACGCGTATTACTATAGAGGGCATTCGCAATGATCCTTGGTTTCGTGTGAATTACATTCCTGTACGACAAGGTGTAGAAGAAGAAGTAAGCTTGGATGATGTTCGTGCTGTTTTTGATGACATTGAGGACCAATTTGTAATTGAGCAGTCTAAGGTCCTTGATAGGGGCCCCTTAATTATGAATGCATTCGAGATGATTACGTTATCTCAAGGACTGAATCTGTCAGCCTTATTTGACAGAAGACAGGATTATGTTAAGAGACAAACCCGCTTTGTTTCCCGGGAATCCCCAAGTGTCATCATCTCAACTATTGAAACTGTTGCTGAGTCAATGGGTCTGAAGGTGCACACGCGTCATTATAAGACAAGACTTGAAGGAATATCAGCTAATAAGGCAGGGCAATTTGCAGTTGTGATGGAGATCTATGAGGTTGCTCCGGCACTTTTCATGGTGGATGTTAGGAAAGCTGCTGGCGACACCCTTGAATACCATAAGTTTTATAAGAACTTCTGTGCTAAAATAGACCACATCATCTGGAAACCCGGTGGCATTTCACATTCCGCCCTGCTTAGAACCACATCTTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49259.p1 GENE.R_Transcript_49259~~R_Transcript_49259.p1 ORF type:complete len:454 (+),score=81.23,Pkinase|PF00069.21|1.1e-72,Pkinase_Tyr|PF07714.13|2.2e-35,NAF|PF03822.10|6.9e-20,Kinase-like|PF14531.2|1.1e+03,Kinase-like|PF14531.2|9.9e-08 R_Transcript_49259:393-1754(+)
MSVGGGREKMVTTRRVGKYEMGRTIGEGTFAKVKFAVNKETGESVAMKVLAKSTILKHKMVNQIKREISIMKIVRHPYIVRLHEVLASRTKIYIILEFVPGGELFDKIVHKGKLSERESRKYFQQLIDAVAHCHGKGVYHRDLKPENLLLDVHGNLKVSDFGLSALPKQGVDLLHTTCGTPNYVAPEVLNSQGYDGAAADIWSCGVILYVLMAGYLPFEETDLATLYKKINSAEFSCPFWFSAIAKSLIDRILDPNPKTRITIEGIRNDPWFRVNYIPVRQGVEEEVSLDDVRAVFDDIEDQFVIEQSKVLDRGPLIMNAFEMITLSQGLNLSALFDRRQDYVKRQTRFVSRESPSVIISTIETVAESMGLKVHTRHYKTRLEGISANKAGQFAVVMEIYEVAPALFMVDVRKAAGDTLEYHKFYKNFCAKIDHIIWKPGGISHSALLRTTSC*

Click here to download the sequence:
Link to NCBI Protein BLAST