Transcript Information: R_Transcript_49270.p1


Annotated TAIR IDAT1G02460.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:504897-507099 | Reverse length=491
E-Value2.8E-157
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.978505626534
Replicate 27.0862513905006
Replicate 39.8785305883407
Condition 2: 8 Hour
Replicate 11.8364398710434
Replicate 22.0264549168574
Replicate 31.361370796529
Condition 3: 24 Hour
Replicate 17.8917462345233
Replicate 24.2732064100494
Replicate 36.4979123289226


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49270.p1 GENE.R_Transcript_49270~~R_Transcript_49270.p1 ORF type:3prime_partial len:320 (-),score=25.22,Glyco_hydro_28|PF00295.13|2.6e-83,Beta_helix|PF13229.2|3.6e-08,Beta_helix|PF13229.2|14 R_Transcript_49270:3-959(-)
ATGCTATTTGTACGAAGTAATGATTCATATGATTTTTTTTGTGTGGATATTGAGAAGATTGAAGGAACAGTTGTACCACCAGATGGACCAGATTCATGGCCTAAGAGTAGCAGCAAAAGGCAATGGTTAATCTTTTATAGAACTCATGGCTTGACTTTCCAAGGTGGTGGCCTTATTGATGGCAGAGGAGAAAAGTGGTGGAATCTTACTTGTAAACCTCATAAAGGCATCAATGGTACCACATTGCCTGGTCCTTGTGACAGCCCAGTTGCTATAAGATTTTTCGGGTGTACAAACTTGACAATTCGAGGGCTAAATCTCATCAACAGCCCTCAGTTTCATATTCGGATTGATGCTTGTCAAAATGTGAATGTGGATTCTCTCTTCATTAAGTCACCAGCTAATAGTCCCAATACTGATGGCATTCACGTTGAGAACACAACTGATGTCACAATATACAACTCTCTCATCTCCAATGGTGATGATTGTATATCAATTGGAGCTGGTAGTCATAATTTGGACATAAGGAATGTTACCTGTGGTCCTAGTCATGGAATAAGCATTGGGAGCCTAGGAGTTCACAACAGCCGGGCCTGTGTATCAAACATAACAGTAACCGACTGCCTGATCAAGCACTCAGACAATGGGGTCCGGATCAAGACATGGCAAGGCGGGTCTGGATCTGTATCCGGTGTAACCTTTGACGGGATCCGGATGGATACTGTCCGAAACCCGATTATCGTAGACCAATACTATTGCCTATATAGCAACTGCTCCAATCAGACATCAGCTGTCTCCATTTCCACAATATCCTACTCCAATATCAAGGGGACATTTGATCCTAGGGCCCCACCTGTCCACCTGGCATGCAGCGATTCGGTCCCATGTACCAACATTACACTGTCGGGTCTGGAGCTCCTGCCCGCTGTGACAACTTATTCGGGTTTGGGTCGCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49270.p1 GENE.R_Transcript_49270~~R_Transcript_49270.p1 ORF type:3prime_partial len:320 (-),score=25.22,Glyco_hydro_28|PF00295.13|2.6e-83,Beta_helix|PF13229.2|3.6e-08,Beta_helix|PF13229.2|14 R_Transcript_49270:3-959(-)
MLFVRSNDSYDFFCVDIEKIEGTVVPPDGPDSWPKSSSKRQWLIFYRTHGLTFQGGGLIDGRGEKWWNLTCKPHKGINGTTLPGPCDSPVAIRFFGCTNLTIRGLNLINSPQFHIRIDACQNVNVDSLFIKSPANSPNTDGIHVENTTDVTIYNSLISNGDDCISIGAGSHNLDIRNVTCGPSHGISIGSLGVHNSRACVSNITVTDCLIKHSDNGVRIKTWQGGSGSVSGVTFDGIRMDTVRNPIIVDQYYCLYSNCSNQTSAVSISTISYSNIKGTFDPRAPPVHLACSDSVPCTNITLSGLELLPAVTTYSGLGRK

Click here to download the sequence:
Link to NCBI Protein BLAST