Transcript Information: R_Transcript_49287.p1


Annotated TAIR IDAT1G12840.1
Annotated Gene Namevacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3)
Annotated Gene Symbol(s)DET3, ATVHA-C
Annotation TypeOrtholog
Chromosome Positionchr1:4375584-4378220 | Forward length=375
E-Value5E-227
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1158.79105128427
Replicate 2162.72132822631
Replicate 3170.46024413307
Condition 2: 8 Hour
Replicate 1120.73615322392
Replicate 2138.44716203798
Replicate 3151.10250330269
Condition 3: 24 Hour
Replicate 1155.63683676441
Replicate 2161.95364307682
Replicate 3144.30749978409


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49287.p1 GENE.R_Transcript_49287~~R_Transcript_49287.p1 ORF type:complete len:376 (+),score=65.58,V-ATPase_C|PF03223.11|3.7e-124 R_Transcript_49287:259-1386(+)
ATGGCGACGAGATACTGGATGGCGTCTCTTCCTGTCCAAACCTCCGCTTCTACTCTATGGAATCAATTACAAGAATCCATCTCCAAACAAGCCTTCGACACTCCTATCTACAGATTCAATACGCCTAATCTTCGTGTGGGCACCCTAGATTCGCTTCTATCACTTGCTGATGACCTCCTTAAGTCGAATGCATTTGTGGAAGGAGTCACGCACAAGATCAGGCGTCAGATCGATGAACTGGAGAGATCATCTGGTGTTGATGCTGGTGCTTTGACTGTTGATGGAGTTCCTATTGATTCTTACCTTACAAGATTTGTTTGGGATGAAGCAAAATATCCAGTTATGTCGCCATTGAAGGAGATTATCGATAACATTCATAGCTTTGTGGCAAAGGTTGAAGACGACCTTAAGGTTCGCGTGGCTGAGTATAACAATGTCCGCAGTCAACTTAGTGCAATAAATCGCAAACAAAGTGGAAGCTTAGCTGTCAGAGATCTTTCCAACTTGGTGAAGCCAGAGGATATTATTGCGACAGAGCATTTGGTAACACTTCTGGCTGTTGTTTCCAAGTATTCTCAAAAGGACTGGTTATCAAGCTATGAATCATTGACTGAATATGTGGTCCCCAGGTCATCTAAGAAGTTGTACGAGGACAATGAATATGCTCTTTACACCGTAACTATGTTTACTCGTGTTGCTGATAACTTCAGAATAAAAGCACGTGAAAGAGGATTTCAGGTTCGAGATTTTGAATACAATCCAGAAACACAAGAGACACGGAAGCAAGAGTTGGAAAAATTGATGCATGACCAGGAATCACTGAGAAGTTCTCTTGTGCAGTGGTGCTATTCTAGTTATGGGGAGGTTTTCAGCTCATGGATGCACTTCTGTGCTGTACGGGTCTTCACTGAGAGCATTTTGAGATATGGCTTGCCACCATCCTTCCTGGCATGTGTCTTGGCTCCATCGCAAAAAAGTGAGAAGAAAGTACGCTCAATTCTTGAACGACACTGCCATACATCAAACAGTGTCCACTGGAAACTGGACGACGAAGTTGGAGGAATGGCTGGTCTGGCGGGTGAAACAGATGCATACCCATATGTATCCTTCACAATCAACCTTGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49287.p1 GENE.R_Transcript_49287~~R_Transcript_49287.p1 ORF type:complete len:376 (+),score=65.58,V-ATPase_C|PF03223.11|3.7e-124 R_Transcript_49287:259-1386(+)
MATRYWMASLPVQTSASTLWNQLQESISKQAFDTPIYRFNTPNLRVGTLDSLLSLADDLLKSNAFVEGVTHKIRRQIDELERSSGVDAGALTVDGVPIDSYLTRFVWDEAKYPVMSPLKEIIDNIHSFVAKVEDDLKVRVAEYNNVRSQLSAINRKQSGSLAVRDLSNLVKPEDIIATEHLVTLLAVVSKYSQKDWLSSYESLTEYVVPRSSKKLYEDNEYALYTVTMFTRVADNFRIKARERGFQVRDFEYNPETQETRKQELEKLMHDQESLRSSLVQWCYSSYGEVFSSWMHFCAVRVFTESILRYGLPPSFLACVLAPSQKSEKKVRSILERHCHTSNSVHWKLDDEVGGMAGLAGETDAYPYVSFTINLV*

Click here to download the sequence:
Link to NCBI Protein BLAST