Transcript Information: R_Transcript_49347.p1


Annotated TAIR IDAT3G19910.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6926497-6929324 | Forward length=340
E-Value3E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.413335276936
Replicate 222.242955753516
Replicate 323.193071816104
Condition 2: 8 Hour
Replicate 126.551859802169
Replicate 235.847288701651
Replicate 333.41030829815
Condition 3: 24 Hour
Replicate 128.051570706351
Replicate 229.56783145018
Replicate 328.522415170113


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49347.p1 GENE.R_Transcript_49347~~R_Transcript_49347.p1 ORF type:complete len:320 (+),score=81.14,zf-RING_2|PF13639.2|3.3e-13,zf-RING_11|PF17123.1|1e-09,zf-RING_11|PF17123.1|9.9e+02,zf-C3HC4|PF00097.21|1.3e-08,zf-rbx1|PF12678.3|3.4e-08,zf-C3HC4_2|PF13923.2|2.6e-07,zf-RING_5|PF14634.2|3.4e-07 R_Transcript_49347:289-1248(+)
ATGGATGAGAACTCAAAGATCGTGGAAGGAGGAGCTCCCAAGACAACAACAACCGGCGTGGATGAGACACCAAACCCTAACCCTAATGATTCGAATTTGAATGTTTCTAATGACGATGCTCCTATCACTGCATCCAATAATAGTGATTCGAATTCGAATTCATCGAGAACTCCTTTCACCAACCTTAGTCAGGTCGATGCTGACCTCGCTCTTGCTCGCACCTTACAGGAACAGGAAAGGGCCTACATGATGCTGAGCATGAATGGTGGCGCAGCTGGATATGGAAGGTGGGATACAGGGATATATTTTGACGGTGATGAGGATGAAGATTTTGGTGATTCCCATGACCATGAATATGATGAGGTTGATGATGATGACGACGACGACAACGATATCGGCGATTATGACGATGATGACGATGATGAGGGAGATGCATTTGATATTCATGCTCATGGTGAGTCAGGAGAGAACAATGCAGTGGCAGTTGATCTCAATCCCACTGCATTCTCTGATGATGAGGCATATGCAAGGGCCTTACAGGATGCTGAAGAGCGAGAAGTGGCTGCAAGATTGTTGGCCATGGCGGGTATAACTGAAAGAGAAATAGTAGATATTGAGGATCAGGGTGGCAATTCTCAGGATACGTGGGAAGAGGTTGATCCCGATGAACTTTCCTACGAGGAACTGCTTGCTTTGGGTGAAGTAGTTGGTACGGAGAGCAGAGGATTATCTGCTGACACGATTGCATCTTTGCCATCAGCAAACTATAAATCCCAAAATACCCCAGAAGCAGAGTGTGACTCGTGCGTCATTTGTCGACTAGAGTATGAGGATGGTGATGCACTGACAACCCTCCCGTGCAAGCACGCCTACCATTCGGACTGCATAACTAATTGGTTGAAAATAAACAAGGCCTGTCCTGTTTGCAGCAAAGAAGTTTCAACGTCTGGCAACAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49347.p1 GENE.R_Transcript_49347~~R_Transcript_49347.p1 ORF type:complete len:320 (+),score=81.14,zf-RING_2|PF13639.2|3.3e-13,zf-RING_11|PF17123.1|1e-09,zf-RING_11|PF17123.1|9.9e+02,zf-C3HC4|PF00097.21|1.3e-08,zf-rbx1|PF12678.3|3.4e-08,zf-C3HC4_2|PF13923.2|2.6e-07,zf-RING_5|PF14634.2|3.4e-07 R_Transcript_49347:289-1248(+)
MDENSKIVEGGAPKTTTTGVDETPNPNPNDSNLNVSNDDAPITASNNSDSNSNSSRTPFTNLSQVDADLALARTLQEQERAYMMLSMNGGAAGYGRWDTGIYFDGDEDEDFGDSHDHEYDEVDDDDDDDNDIGDYDDDDDDEGDAFDIHAHGESGENNAVAVDLNPTAFSDDEAYARALQDAEEREVAARLLAMAGITEREIVDIEDQGGNSQDTWEEVDPDELSYEELLALGEVVGTESRGLSADTIASLPSANYKSQNTPEAECDSCVICRLEYEDGDALTTLPCKHAYHSDCITNWLKINKACPVCSKEVSTSGNS*

Click here to download the sequence:
Link to NCBI Protein BLAST