Transcript Information: R_Transcript_49353.p1


Annotated TAIR IDAT3G19910.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6926497-6929324 | Forward length=340
E-Value9.5E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.998052216342
Replicate 210.596263761496
Replicate 312.559457373591
Condition 2: 8 Hour
Replicate 111.136873153576
Replicate 217.763317350475
Replicate 317.190310369463
Condition 3: 24 Hour
Replicate 114.01785114215
Replicate 210.855859516234
Replicate 314.319059140961


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49353.p1 GENE.R_Transcript_49353~~R_Transcript_49353.p1 ORF type:complete len:321 (+),score=80.08,zf-RING_2|PF13639.2|1.5e-12,zf-C3HC4|PF00097.21|1e-08,zf-RING_11|PF17123.1|2.5e-08,zf-RING_11|PF17123.1|9.9e+02,zf-rbx1|PF12678.3|2.2e-07,zf-C3HC4_2|PF13923.2|3.7e-07,zf-RING_5|PF14634.2|6.9e-07 R_Transcript_49353:293-1255(+)
ATGGATGAGAACTCAAAGATCGTGGAAGGAGGAGTTCCCAAGACAACAACAACCACCGTCGATGAGACGCCAAACCTTAACCCTAACCCTAATCATTCGAATTCGAATTTTTCTAATGGCGATGCTCCTGTCACTGCTTCCAATAATAGTGATTCGAATTCAAATTCATCGAGAACTCCTTTCACCAACCTTAGTCAGGTCGATGCTGACCTCGCTCTTGCTCGCACCTTACAGGAACAGGAAAGGGCCTACATGATGCTGAGCATGAATGGTGGCGCAGCTGGATATGGAAGGTGGGATACAGGGATATATTTTGACGGTGATGAGGATGAAGATTTTGGTGATTCCCATGACCATGAATATGATGAGGTTGATGATGTCGATGACGACGACGACGATGATATCGGCGATTATGACGACGACGATGAGGGAGATGCATTCGATGTTCATGCTCATAATGAGTCAGGAGAGAACAATGCATTGGCAGTTGATCTCGATCCTACTGCATTCTCTGATGATGAGGCATATGCAAGGGCCTTACAGGATGCTGAAGAGCGAGAAGTGGCTGCAAGATTGTTGGCCATGGCGGGTATAACTGAAAGAGAAATAGTAGATATTGAGGATCAGGGTGGCAATTCTCAGGATACGTGGGAAGAGGTTGATCCCGATGAACTTTCCTACGAGGAACTGCTTGCTTTGGGTGAAGTAGTTGGTACGGAGAGCAGAGGATTATCTGCTGACATGATTGCATCTTTGCCATCAACAAACTATAAATCCCAAAATACTCCAGAAGCGGAGTGTGACTCGTGTGTCATTTGTCGATTAGAGTATGAGGATGGTGCTGGACTGACAACCCTCCCGTGCAAGCACGCCTACCATTCGGACTGCATAACTAATTGGTTGAAAATAAACAAGGCCTGTCCTGTTTGCAGCAAAGAAGTTTCAACGTCTGGCAACAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49353.p1 GENE.R_Transcript_49353~~R_Transcript_49353.p1 ORF type:complete len:321 (+),score=80.08,zf-RING_2|PF13639.2|1.5e-12,zf-C3HC4|PF00097.21|1e-08,zf-RING_11|PF17123.1|2.5e-08,zf-RING_11|PF17123.1|9.9e+02,zf-rbx1|PF12678.3|2.2e-07,zf-C3HC4_2|PF13923.2|3.7e-07,zf-RING_5|PF14634.2|6.9e-07 R_Transcript_49353:293-1255(+)
MDENSKIVEGGVPKTTTTTVDETPNLNPNPNHSNSNFSNGDAPVTASNNSDSNSNSSRTPFTNLSQVDADLALARTLQEQERAYMMLSMNGGAAGYGRWDTGIYFDGDEDEDFGDSHDHEYDEVDDVDDDDDDDIGDYDDDDEGDAFDVHAHNESGENNALAVDLDPTAFSDDEAYARALQDAEEREVAARLLAMAGITEREIVDIEDQGGNSQDTWEEVDPDELSYEELLALGEVVGTESRGLSADMIASLPSTNYKSQNTPEAECDSCVICRLEYEDGAGLTTLPCKHAYHSDCITNWLKINKACPVCSKEVSTSGNS*

Click here to download the sequence:
Link to NCBI Protein BLAST