Transcript Information: R_Transcript_4941.p1


Annotated TAIR IDAT1G20693.1
Annotated Gene Namehigh mobility group B2
Annotated Gene Symbol(s)HMGB2, HMG BETA 1, NFD2, NFD02
Annotation TypeOrtholog
Chromosome Positionchr1:7177282-7178487 | Forward length=144
E-Value1.3E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11318.8389391187
Replicate 21273.7276218298
Replicate 31334.7097036334
Condition 2: 8 Hour
Replicate 11675.7723462526
Replicate 21834.204937877
Replicate 31564.6439702573
Condition 3: 24 Hour
Replicate 11324.0050469676
Replicate 21307.1517478093
Replicate 31282.9792925374


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4941.p1 GENE.R_Transcript_4941~~R_Transcript_4941.p1 ORF type:complete len:146 (+),score=48.97,HMG_box|PF00505.15|4.6e-24,HMG_box_2|PF09011.6|1.3e-17 R_Transcript_4941:152-589(+)
ATGAAGGGAGGAAAATCCAAGGCCGAGCCTAAGCGCTCCGATAGCAAGATGTCTGTGAAGAAAGGAGCAGCGGCTAAGAAAGGAAAGCCTGCTAAGGATCCTAACAAGCCTAAGAGGCCTCCTAGCGCCTTCTTCGTTTTCATGGAGGAATTTAGAGTGACATACAAACAAAAGCATCCTAACAACAAATCTGTCGCCGCTGTTGGGAAAGCCGGTGGTGAGAAGTGGAAGTCCCTAAGTGACGCTGAGAAAGCACCTTACATACAAAAGGCCGAGAAGAGGAAAGCTGATTATGAAAGGAATATGAATTCGTACAACAAGAGATTGGCTGAAGGTACGAAACATGAGGAAGAGGAAGAGGAATCAGACAAGTCTAGGTCTGAGGTTAATGATGAGGATGATGACGATGAAGGCAGTGGTGAGGAGGATGATGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4941.p1 GENE.R_Transcript_4941~~R_Transcript_4941.p1 ORF type:complete len:146 (+),score=48.97,HMG_box|PF00505.15|4.6e-24,HMG_box_2|PF09011.6|1.3e-17 R_Transcript_4941:152-589(+)
MKGGKSKAEPKRSDSKMSVKKGAAAKKGKPAKDPNKPKRPPSAFFVFMEEFRVTYKQKHPNNKSVAAVGKAGGEKWKSLSDAEKAPYIQKAEKRKADYERNMNSYNKRLAEGTKHEEEEEESDKSRSEVNDEDDDDEGSGEEDDD*

Click here to download the sequence:
Link to NCBI Protein BLAST