Transcript Information: R_Transcript_49424.p1


Annotated TAIR IDAT2G03820.1
Annotated Gene Namenonsense-mediated mRNA decay NMD3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:1165149-1166699 | Reverse length=516
E-Value1.6E-248
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.715511622187
Replicate 216.9443827921
Replicate 319.379189311365
Condition 2: 8 Hour
Replicate 116.658025081069
Replicate 220.878874077832
Replicate 320.274606014584
Condition 3: 24 Hour
Replicate 121.883757766759
Replicate 219.217740202901
Replicate 320.223727137601


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49424.p1 GENE.R_Transcript_49424~~R_Transcript_49424.p1 ORF type:complete len:513 (+),score=117.68,NMD3|PF04981.9|2.4e-71 R_Transcript_49424:122-1660(+)
ATGGAGCAGGATTCTGGTATGTTTTTTGTGCATCAGACTGTGGGCACAGTTCTTTGCTGCAAATGTGGGATTCTTATGCAACAAAATGCGGCCAATATGTGTGTGAAGTGTTTGCGTTCAGAAGTCGACATCACTGAAGGCTTGCTTAAGCATGTCACAGTCTTGTTTTGCCCTGATTGTGAGACTTACTTGCAGCCTCCGAAGACGCGTATTAAAGCCCAGCTAGAATCGAGAGAACTTCTAACATTCTGCTTGAAGAAGCTGAATTTGGATAAAGCTAAGGTCACATTGGTGCATGCTGAGTTTGTGTGGACTGAGGAACACTCAAAGAGGATTAAAGTTAAAGTGACAATTCAGAAAGAAGTCCTTCACGGGGCTGTGTTACAGCAAGCTTATCAGGTTGAGTATGTTGTGCACCATCAGATGTGTGATGGGTGTATGAGGCTCCAGGCGAATCCCGATCAGTGGGTGGCAGCTGTTCAACTTAGGCAGCATGTCACTCACAGAAGGACTTTCTTCTATCTGGAGCAACTCATTCTTAAACATGATGCTGCAGGCCAAGCAGTCAGGATTAAGGGGCTAGAACAGGGCATTGATTTCTTCTTCTCCAACAGAAGTCATGCTGTAAAGTTTGTTGAGTTTGTGGGCAAAGTTGCACCTGTCAGGAGCCGCAATGACAAAGAACTTGTGTCTCAAGATTCAAAGAACAACACTTACAATTACAAGTACACCTTCTCTGTTGAGATTTGTCCCATCTGTCGTGAGGACCTAATCTGTCTCCCTCCAAAAGTGTCTATCAATTTGGGGAATTTGGGTCCCATTGTGATTTGCACAAAAGTAAGCAACAGCATAATGTTGACGGATCCAAACACTTTGAGGTATTGTTTCTTGGATGCTGATCAGTACTGGAGATCACCTTTCCACTGTCTGCTTTCTAGCAGACGACTTGTGGAATACATTGTGCTGGATGTCGATAATGTTTCTGCTGAGGTTAATGTTGCTGGCTCAAGATATGCTTTGGCTGATGTCCAAGTGGCTCGTGTATCAGATTTTGGAAGGAATGACACAATTTTCTTTGTTAGGACACACTTGGGTCATCTTTTAAGTCCAGGGGATTATGCCCTTGGCTATGATCTCTATGGGGCTAACCTCAATGACTCTGAGTTGGACAAATACAGAGGTCTTGTCCTTCCCGAAGCAATCTTGATTAAGAAGAGCTATGAAGAGAAGCGTCAAAGAAAACGTGGGAAGCATCGGGCTTGGAAACTCAGGAACCTTGAAATGGAGGTGGAGAATGCAGCTAGAGGTAGAGTTGACCAGGATAAGATGGATAATGAGTATGAGCATTTTTTGAGAGACTTGGAAGAAAATCCTGAGTTGAGGTTTAATATATCATTGTATCGCAACAAGGAGTATCAGCCATCAGAAACTGCATCTATGACCGACGGCGATGAGCTGCCTTCTGTACCTCTGGATGAGCTGCTTGCTGATCTTGATTTAAGTGATGATGAAGCTGGCGGTAGTAACATGAGGGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49424.p1 GENE.R_Transcript_49424~~R_Transcript_49424.p1 ORF type:complete len:513 (+),score=117.68,NMD3|PF04981.9|2.4e-71 R_Transcript_49424:122-1660(+)
MEQDSGMFFVHQTVGTVLCCKCGILMQQNAANMCVKCLRSEVDITEGLLKHVTVLFCPDCETYLQPPKTRIKAQLESRELLTFCLKKLNLDKAKVTLVHAEFVWTEEHSKRIKVKVTIQKEVLHGAVLQQAYQVEYVVHHQMCDGCMRLQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAAGQAVRIKGLEQGIDFFFSNRSHAVKFVEFVGKVAPVRSRNDKELVSQDSKNNTYNYKYTFSVEICPICREDLICLPPKVSINLGNLGPIVICTKVSNSIMLTDPNTLRYCFLDADQYWRSPFHCLLSSRRLVEYIVLDVDNVSAEVNVAGSRYALADVQVARVSDFGRNDTIFFVRTHLGHLLSPGDYALGYDLYGANLNDSELDKYRGLVLPEAILIKKSYEEKRQRKRGKHRAWKLRNLEMEVENAARGRVDQDKMDNEYEHFLRDLEENPELRFNISLYRNKEYQPSETASMTDGDELPSVPLDELLADLDLSDDEAGGSNMRE*

Click here to download the sequence:
Link to NCBI Protein BLAST