Transcript Information: R_Transcript_49456.p2


Annotated TAIR IDAT4G30820.1
Annotated Gene Namecyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:15007144-15008378 | Forward length=178
E-Value1.4E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6715343143021
Replicate 21.8257652535911
Replicate 34.3157621557968
Condition 2: 8 Hour
Replicate 14.0809774912075
Replicate 24.6990258941622
Replicate 36.8397373352183
Condition 3: 24 Hour
Replicate 12.9944965949179
Replicate 24.155338631558
Replicate 35.7098360052776


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49456.p2 GENE.R_Transcript_49456~~R_Transcript_49456.p2 ORF type:5prime_partial len:138 (+),score=43.44,MAT1|PF06391.9|5.8e-31 R_Transcript_49456:1-414(+)
TCAAATTTGAGTTTCATCTTTGTTCCTTCTGCTCAATCTGTGTATACAAGATTGACAGATTGGGAAGCAGCAGAGAAGGGGGCTGTAATGGTGGTTTCTTCCACAGCAAACCCATTTGCCAAAGAGATGGCTATTCGCAAAAGAATTGCGAGCATATTTAATAAGAGAGAAGATGATTTCCCATCCTTGAAAGAGTACAATGATTACTTGGAGGAAGTTGAGGATATGACATGCAACTTAATAGAAGGAATAGATGTTGCCGCCATTGAAGCTAAAATTGCCAAATACGAGCAAGAAAATGCTGAGCAAATAATGAATGCACGAGCTCGCAAGGCCGAGGAGCTAGCAGAAGCTCTAGCTGCCAGCAAGGGTCCTGCACATGTTGACACTGAAGTGGCCATCGATCAGAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49456.p2 GENE.R_Transcript_49456~~R_Transcript_49456.p2 ORF type:5prime_partial len:138 (+),score=43.44,MAT1|PF06391.9|5.8e-31 R_Transcript_49456:1-414(+)
SNLSFIFVPSAQSVYTRLTDWEAAEKGAVMVVSSTANPFAKEMAIRKRIASIFNKREDDFPSLKEYNDYLEEVEDMTCNLIEGIDVAAIEAKIAKYEQENAEQIMNARARKAEELAEALAASKGPAHVDTEVAIDQS*

Click here to download the sequence:
Link to NCBI Protein BLAST