Transcript Information: R_Transcript_4946.p2


Annotated TAIR IDAT1G20696.2
Annotated Gene Namehigh mobility group B3
Annotated Gene Symbol(s)HMGB3, NFD3, NFD03
Annotation TypeOrtholog
Chromosome Positionchr1:7179825-7181193 | Forward length=147
E-Value1E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6505921909438
Replicate 23.7326756295641
Replicate 36.108463358974
Condition 2: 8 Hour
Replicate 16.5295639859321
Replicate 26.7082645523557
Replicate 38.2690670603985
Condition 3: 24 Hour
Replicate 13.5712144576429
Replicate 21.2252921605876
Replicate 35.8367212498393


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4946.p2 GENE.R_Transcript_4946~~R_Transcript_4946.p2 ORF type:complete len:90 (+),score=13.52,HMG_box|PF00505.15|3.1e-08,HMG_box_2|PF09011.6|9e-06 R_Transcript_4946:351-620(+)
ATGAAGGGAGGAAAATCCAAGGCCGAGCCTAAGCGCTCCGATAGCAAGATGTCTGTGAAGAAAGGAGCAGCGGCTAAGAAAGGAAAGCCTGCTAAGGATCCTAACAAGCCTAAGAGGCCTCCTAGCGCCTTCTTCGTTTTCATGGAGGAATTTAGAGTGACATACAAACAAAAGCATCCTAACAACAAATCTGTCGCCGCTGTAAGTTTTCTTCTGTATTTTGCTTTCATAATCTCCACTTTGCTCTGTCAAATGGTACCGAATTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4946.p2 GENE.R_Transcript_4946~~R_Transcript_4946.p2 ORF type:complete len:90 (+),score=13.52,HMG_box|PF00505.15|3.1e-08,HMG_box_2|PF09011.6|9e-06 R_Transcript_4946:351-620(+)
MKGGKSKAEPKRSDSKMSVKKGAAAKKGKPAKDPNKPKRPPSAFFVFMEEFRVTYKQKHPNNKSVAAVSFLLYFAFIISTLLCQMVPNF*

Click here to download the sequence:
Link to NCBI Protein BLAST