Transcript Information: R_Transcript_49622.p1


Annotated TAIR IDAT5G35970.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:14119060-14123078 | Reverse length=961
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.593600867926
Replicate 211.891321656879
Replicate 311.800440579836
Condition 2: 8 Hour
Replicate 110.10649598136
Replicate 212.477231873765
Replicate 313.808121767651
Condition 3: 24 Hour
Replicate 118.135948029409
Replicate 214.150395986222
Replicate 315.826846022291


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49622.p1 GENE.R_Transcript_49622~~R_Transcript_49622.p1 ORF type:complete len:957 (+),score=211.66,AAA_12|PF13087.2|2.4e-50,AAA_11|PF13086.2|1.8e+03,AAA_11|PF13086.2|1.2e-47,AAA_30|PF13604.2|1.3e-10,AAA_30|PF13604.2|1.5e+03,AAA_19|PF13245.2|1.5e-09,AAA_19|PF13245.2|2.9e+02,AAA_19|PF13245.2|1.9e+02,Viral_helicase1|PF01443.14|4.3,Viral_helicase1|PF01443.14|35,Viral_helicase1|PF01443.14|0.049,DEAD|PF00270.25|2.7e+03,DEAD|PF00270.25|0.00042,DEAD|PF00270.25|56 R_Transcript_49622:214-3084(+)
ATGATGGAAGCTTCTCGTTGCTATGTATGTTCGGGCTGTTCATTGAAGAACAAATTGCCGAGCTTTAGTACTTGGGGTAGCATTAATCCATGGCGAAATGCGTCTTTTTCTTCGATCAACTTATTGAGTCTCAGCATGAGCCGCCGCCATAATTCTCGTAGTGTTACAGTGTGCTATCAATATCAACAGAAATCACCTCCTAGTAGTAGTAGTAGTGATGAGAAGGAGGACAAGAAAAACAATGGTAAGAGGAGGCGTAGTGCTAGTACAAGTAAGAGGAGCTTGAATGTTAGAGGACTGCAAGCCTCCCAGCAAGGCGACCCATTGGGTAGAAGGGATCTAGGGAAGCAGGTCGTGCGATGGATAAGTCAGGGAATGAGGGGAATGGCTTCAGATTTTGCTAAAGTTGAGATACAGGGAGATTTCTTTGACCTTGAGCAGCGAATTGCTCCCGGTCTCACTTTCCTCATGGAAGCTCAGCCTTATTTGAGCGCAGTCCCAATGCCCCTTGGTCTTGAAGCCATCTGCTTAAAGGCTTGTACTCATTATCCCACCATTTTCGACCATTTCCAGCGTGAGCTCAGGGATGTTCTGCAGGGTTTGCAGGCTAAATCCATGGTTGAGGATTGGCGTGAAACCCAGTCCTGGAAGCTCCTCAAGCGTCTCGCTAACTCAGCTCAGCACAAAACTATAGCTCGAAAAACATCCCAGCCAAAGCCTACTAGCGGTGCTTTAGGGCTTGACATTGATAAGGTGAAGGCAATACAGAGTAGCATTGACCAATACACAAAGCATATGGCGAACTTGCTCCGCATAGAAAGGGATGTGGAGTTGGAGTTCACCCAAGAAGAGTTGAATGCAATGCCAATGCCTGTTGAGAATTCTGATTCAACCAGGCCAATTGAATTTTTGGTTACTCATGGGCAGTCCCAGCAAGAACTATGTGATACACTTTGCAACTTGATTGCAGTTAACACTTCAACAGGATTAGGTGGAATGCATTCAGTGGTTTTTAGGGTTGAGGGAAATCATCGATTGCCACCTACCTCCCTTTCTCCAGGGGATATGGTATGTGTGAGAATATGTGATAGTAGAGGCGCAGGTGCCACTTCATGTGTTCAAGGTTTTGTTGACAATCTTGGGGAGGATGGGTGCAGTATTAGTGTAACTCTAGAGTCTCAGCATGGTGATGCCACATTTTCAAAGCTCTTTGGGAAGCTTGTACGAATCGATCGGATTCATGGATTGGCTGACACTTTAACTTATGAGCGTAATTGTGAGGCTCTGATGCTGCTACAGAAGAATGGTTTGCAGAAAAAAAATCCAGCAATTGCTGTAGTAGCTACTTTGTTTGGTGATAAGAGCGATGTTGATTGGCTGGAAGATAATGATGTAGTAGATTTAAATGAAGAAGAAGTTGATGGCCTGCTGGAGAGTAGCAGTTATGATGATTCTCAGCGAAGAGCGATTGCCTTGGGCTTAAATAAGAAACGTTCCATACTAGTGATTCAAGGTCCACCTGGTTCTGGAAAATCAGGGTTGCTTGAAAGACTCATTGTCCTTTCTGTTGAACGTGGTGGAAAAGTGCTTGTCACAGCCCCAACAAATGCTGCCATTGATAACATGGTTGAGAAACTCTCAGATATTGTGATAAACATTGTTCGAATGGGAAATCCAGCTCGCATATCTGCAGCTGTTTCCTCAAAATCATTAGGTGAGATTGTCAATGTTAGAATGGAGAAATTCAGGGTAGAATTAGAAAGGAAAAGGGCTGATCTAAGGAAAGATCTAAGAATGTGTTTAAAAGATGATTCATTAGCTGCTGGCATACGTCAACTACTAAAGCAACTTGCCAAGGAATTAAAAAAGAAGGAGAAAGAGACTGTTAGGGAGATATTGTCAAGTGCTCAAGTTATTCTTGCTACTACCACTGGAGCTGCAGATACACGTATCAGAAGGCTGGGGCCTTTTGATTTGGTTGTCATAGATGAAGCAGGACAAGCAATTGAGCCGTCAAGCTGGATCCCTATACTGCAGGGGAGACGTTGTATTCTTGCAGGTGATCAATTTCAGCTTGCTCCTGTGGTCTTATCCAGGAAAGCACTAGAAGGTGGCCTTGGAATCTCACTTCTGGAAAGAGCAGCAAATTTGCATGAAGGACTTCTCATTGCTAAGTTGACAATACAGTACCGGATGAATGATGTCATTGCCAGCTGGGCTTCCAAGGAAATGTATGGTGGGTCATTGAAATCGGCTGCAAATGTCTCATCTCATCTTCTCATAGATTCTCCATTTGTGAAGCATACATGGATTACACAATGCCCATTGCTATTGCTTGATACAAGAATGCCATATGGATGTTTGTCTGTTGGTTGTGAAGAGCAAATGGATCCAGCTGGTACTGGTTCCTTCTACAATGAGGGAGAGGCGAATGTAGTTATCCAGCATGTCTTGTCATTGGTTTATGCAGGTGTTAATCCAGAAGCCATTGCCATTCAGTCTCCATATGTTGCTCAGGTACAACTGTTGAGAGAGAGACTTCATGAAATCCCTGAGGCTAGAGGTATTGAAGTGGCAACAATTGATAGTTTTCAAGGACGAGAAGCTGATGCCGTAATTATCTCAATGGTTCGATCAAACACAATGGGTGCTGTTGGCTTCCTTGGGGATAGTAGGCGAATGAATGTTGCCATAACGAGGGCACGCAAGCATGTTGCCATTGTTTGTGATAGCTCAACTATTTGTCATAACACCTTTTTGGCCAGGCTTTTGCGCCATATTCGATATTTCGGGCGGGTGAAGCAAGCTGAGCGTGATAATTTTGGAGGCCCTGGACTCGATTCAAATCCATTATTACCATCAATTCGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49622.p1 GENE.R_Transcript_49622~~R_Transcript_49622.p1 ORF type:complete len:957 (+),score=211.66,AAA_12|PF13087.2|2.4e-50,AAA_11|PF13086.2|1.8e+03,AAA_11|PF13086.2|1.2e-47,AAA_30|PF13604.2|1.3e-10,AAA_30|PF13604.2|1.5e+03,AAA_19|PF13245.2|1.5e-09,AAA_19|PF13245.2|2.9e+02,AAA_19|PF13245.2|1.9e+02,Viral_helicase1|PF01443.14|4.3,Viral_helicase1|PF01443.14|35,Viral_helicase1|PF01443.14|0.049,DEAD|PF00270.25|2.7e+03,DEAD|PF00270.25|0.00042,DEAD|PF00270.25|56 R_Transcript_49622:214-3084(+)
MMEASRCYVCSGCSLKNKLPSFSTWGSINPWRNASFSSINLLSLSMSRRHNSRSVTVCYQYQQKSPPSSSSSDEKEDKKNNGKRRRSASTSKRSLNVRGLQASQQGDPLGRRDLGKQVVRWISQGMRGMASDFAKVEIQGDFFDLEQRIAPGLTFLMEAQPYLSAVPMPLGLEAICLKACTHYPTIFDHFQRELRDVLQGLQAKSMVEDWRETQSWKLLKRLANSAQHKTIARKTSQPKPTSGALGLDIDKVKAIQSSIDQYTKHMANLLRIERDVELEFTQEELNAMPMPVENSDSTRPIEFLVTHGQSQQELCDTLCNLIAVNTSTGLGGMHSVVFRVEGNHRLPPTSLSPGDMVCVRICDSRGAGATSCVQGFVDNLGEDGCSISVTLESQHGDATFSKLFGKLVRIDRIHGLADTLTYERNCEALMLLQKNGLQKKNPAIAVVATLFGDKSDVDWLEDNDVVDLNEEEVDGLLESSSYDDSQRRAIALGLNKKRSILVIQGPPGSGKSGLLERLIVLSVERGGKVLVTAPTNAAIDNMVEKLSDIVINIVRMGNPARISAAVSSKSLGEIVNVRMEKFRVELERKRADLRKDLRMCLKDDSLAAGIRQLLKQLAKELKKKEKETVREILSSAQVILATTTGAADTRIRRLGPFDLVVIDEAGQAIEPSSWIPILQGRRCILAGDQFQLAPVVLSRKALEGGLGISLLERAANLHEGLLIAKLTIQYRMNDVIASWASKEMYGGSLKSAANVSSHLLIDSPFVKHTWITQCPLLLLDTRMPYGCLSVGCEEQMDPAGTGSFYNEGEANVVIQHVLSLVYAGVNPEAIAIQSPYVAQVQLLRERLHEIPEARGIEVATIDSFQGREADAVIISMVRSNTMGAVGFLGDSRRMNVAITRARKHVAIVCDSSTICHNTFLARLLRHIRYFGRVKQAERDNFGGPGLDSNPLLPSIR*

Click here to download the sequence:
Link to NCBI Protein BLAST