Transcript Information: R_Transcript_49659.p1


Annotated TAIR IDAT1G55870.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)ATPARN, AHG2
Annotation TypeOrtholog
Chromosome Positionchr1:20895663-20898359 | Forward length=689
E-Value1.3E-254
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.620858290248
Replicate 27.1538641307608
Replicate 36.9164387755696
Condition 2: 8 Hour
Replicate 18.7837105558677
Replicate 29.3841373931845
Replicate 311.036782634834
Condition 3: 24 Hour
Replicate 18.4581395049436
Replicate 28.2172640464893
Replicate 39.3977679403576


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49659.p1 GENE.R_Transcript_49659~~R_Transcript_49659.p1 ORF type:complete len:722 (+),score=114.10,CAF1|PF04857.16|1.8e-83 R_Transcript_49659:433-2598(+)
ATGAGGAAGCTAACGAGAATAAACCCATTTTCTCTCTCATCATCACCAATACAAATACAATCCTCTTCAGTTGCCCTAATTAAAACCCTAACTTCACTATCATCCCCAACATTCTCTCTCAAAAATGTAACAAAATCAAACTTCGAAGCAGCCTTAGAAGACCTCATTCCTCAAATTAGGGCTGCCGATTTTGTGGCGGTTGACCTAGAAATGACCGGAATCACCAGTACACCGTGGCGCGAATCTTTTGAGTTCGATCGTTACGATGTTCGGTACCTTAAAGTTAAGGATTCAGCGGAGAAGTTCGCTGTTGTTCAGTTCGGTGTTTGTCCTTTTCGTTGGGACCCTCTCAAGCTCTCTTTCATTGCTCACCCGCACAATTTTTATATATTTCCTCGTCAAGAGCTTCCTGCTGATGGCCCGTCTAATGAGTTCCTGTGTCAAACAACATCCATTGACTTCTTGGCACAGTACCAATTTGATTTTAATGCCTGCATACATGAAGGAGTGTCTTATTTATCCAGAGGACAGGAATACAAGGCTTTGAAGCGCTTGAATTCAGTATATAGTGGGAAATGGCATAATATGGAGGAAGTTAGAGATGTACCATTGGTCAATGTGGCTGACATTCTTTTCTGTGAACGTATGAAGATTCGGCTAAATGAGTGGCATGATGATATACTACAAAATAGAAAAGCCACTCCTCAATTGTGTGGATATGCTGCTGAATCGAAACAACAATTTGAAACCATATTTTTTAACATGCGTCCAGCTCTTAGGCTGAATGGATTCACTTCTCATCAGTTGAAGTTGATTGAACTGGTCACAAGGAAACATTTTGCAGATCTCAACTTTGTCTGTGCGTATGATCAAGACTCTATTTTGAAGAAACTTGTTGTTTTTACAGAATCTGAGAATGACAGGAGTAACCTTTTGAAAGTGGTGAAGGATGAGCTTCACCAACATGCAAAGGGAAAGGTAAAAGAGGCTATCGGATTCCGGCATGTAATTGACCTCCTGTGTGCAGAAAAGAAATTAATTGTAGGTCACAATTGCTTCTTGGATATGGCTCACATGTATCACAAATTCTTTGGTCCTCTTCCGTCAACTGCAGAGGAGTTTGCAGCAAATATTCACAACTCTTTCCCTCATATCATCGACACAAAAATACTGTTGAATGCTGACAGTGGGCTTCAAAAACTTATGAAGAAAGCCAGCACATCACTAGCCTCATCCTTTTCTCAGTTATGTCCAGGGATTGCCTCCAGAAAATCCTCAGATTTGGATGTACAGCCCTGTGTCATGGTGGAGGTCCAGGTGGATGATATGAGGTCATCCAACTGGAATTCTGGAGCAAAGCATGAAGCTGGTTATGATGCATTCATGACTGGATGTGTCTTTGCACAAGCCTGCAGTCATCTTGGTATCGATTTCCCTACCAAAAGCGTAGCCCAAATAGAGAAGCTTGAAGAGTACATCAATCTTCTTTATCTCAGTTGGAATAGTGGAGATGTGATCAACTTAAGCACAGGTGAGACAAGGGAACTTCCTAGCATCAATAATATCAGGAGGAGGTTTCTGAAGATTCTGTACCCTAACATGGTTTTGATTTGGGGATTTCCTCCAAAAGTCAATACAAGGGAGATAAGAGAGTGCGTATCTAAAGTATTTGGCATTCACTCAATTACTTCTATCTATCAATTAGATGAAACTGCAGTGTTTATTCAGTTCAGCAAGGCTGAGCTGGTTGCTGACTTTCTTACATTGAAGGAGAGACTTGAAGCAAGTAACGATTCCATTTCCGTGCTACATCCTTTGTCAAAGCTGTTAGGAGGAGGAAAAACATGTGCTGCCGGTTATGAATTTTACAAGAATATTTGCAGCTCCCCAACTTCTAAGGTCTTGTTTGCAGAACAGGCAGAGTCCTTGGGAATAAATTGGAAGACCGAAGGTATAGAATTCAAGGCAGAGATCGAGGATCCAAATCAAGAACAGTGCTTTACGGGAACCACAAGTTCAAGCCATTCATCCAAGATTAACAGCAACAAATTGAAGAAAGATGTTCCTAAAATGACGCAAAATCATAGCATTTTTGATAAGTTGTTGTACGCTTCTGGTACTGAACCAAACAGAGAGATGAAAGTAACTGACTTGTATAATTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49659.p1 GENE.R_Transcript_49659~~R_Transcript_49659.p1 ORF type:complete len:722 (+),score=114.10,CAF1|PF04857.16|1.8e-83 R_Transcript_49659:433-2598(+)
MRKLTRINPFSLSSSPIQIQSSSVALIKTLTSLSSPTFSLKNVTKSNFEAALEDLIPQIRAADFVAVDLEMTGITSTPWRESFEFDRYDVRYLKVKDSAEKFAVVQFGVCPFRWDPLKLSFIAHPHNFYIFPRQELPADGPSNEFLCQTTSIDFLAQYQFDFNACIHEGVSYLSRGQEYKALKRLNSVYSGKWHNMEEVRDVPLVNVADILFCERMKIRLNEWHDDILQNRKATPQLCGYAAESKQQFETIFFNMRPALRLNGFTSHQLKLIELVTRKHFADLNFVCAYDQDSILKKLVVFTESENDRSNLLKVVKDELHQHAKGKVKEAIGFRHVIDLLCAEKKLIVGHNCFLDMAHMYHKFFGPLPSTAEEFAANIHNSFPHIIDTKILLNADSGLQKLMKKASTSLASSFSQLCPGIASRKSSDLDVQPCVMVEVQVDDMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFPTKSVAQIEKLEEYINLLYLSWNSGDVINLSTGETRELPSINNIRRRFLKILYPNMVLIWGFPPKVNTREIRECVSKVFGIHSITSIYQLDETAVFIQFSKAELVADFLTLKERLEASNDSISVLHPLSKLLGGGKTCAAGYEFYKNICSSPTSKVLFAEQAESLGINWKTEGIEFKAEIEDPNQEQCFTGTTSSSHSSKINSNKLKKDVPKMTQNHSIFDKLLYASGTEPNREMKVTDLYNS*

Click here to download the sequence:
Link to NCBI Protein BLAST