Transcript Information: R_Transcript_4966.p1


Annotated TAIR IDAT1G01660.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:240057-242608 | Reverse length=568
E-Value4.1E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.745757215491
Replicate 23.8539097307627
Replicate 36.9348168646278
Condition 2: 8 Hour
Replicate 15.7201782236711
Replicate 26.9028228806521
Replicate 38.0265167344023
Condition 3: 24 Hour
Replicate 17.9900830875919
Replicate 25.4152363902967
Replicate 39.0263954966227


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4966.p1 GENE.R_Transcript_4966~~R_Transcript_4966.p1 ORF type:complete len:839 (+),score=180.95,Pkinase|PF00069.21|1.5e-31,Pkinase_Tyr|PF07714.13|3.5e-29,U-box|PF04564.11|4.1e-19 R_Transcript_4966:221-2737(+)
ATGGAGGTTTTAACACCAACACTTCCACCTGGACCAACCGTTGATCGGTATTCCCTGTTCTCCGCTTCTTCTTTGTTAAGGTCGAGCTCGAGATTTGCTGAGATAATGGAAGAAACTAGGAGAGAGAAAGTGTACGTGGCAGTTGGAAAATCAGAAGAAAAGGCTATTACTTTGCTCCAATGGACCCTCCGTAATTTTCGGAGCTCCGAAATTTGCCTTGTTCATGTTCATCAACCCTCTCCTCTTATCCCTACTCTGCTGGGAAAGCTTCCTGCAAGTCAGGCAAATGGGGAAACGGTGGCTACTTACAGAAGAGAAGAACGAGAAAAGATGAAAAAACTTCTCCTCAGTTACTTAAACATTTGCTCCAGAGCTAAGGTAAAAGCCAGCATTTTCATTACTGAAGCTGAACAAGTTCAGAAAGGACTTCTGGAGCTGCTAGTTGAACATGGGATGGAGAAGCTTGTGATGGGGTCCGTTCCTGAAAATTGTGTGAAGGTGAGAAAGAGTTCTAAGAAAGCAAATTATGCTGCCAAAAATGCTCCTGCATTTTGTGAGATACTCTTTATCTACAAGGGGAAACATGTATGGACTCGAGAAGCATTAGAAGTTACTACTGATCCAAATTGTCGTGCAGATAAGTTAGCCACCGAGTGGCTGAGGTCAAAATCATTCCAATACAGCAGCAGCAAGCCCCTGTACAACCGAGACCATATTCAGTCTAATTCTTCTCGTTTAAGCACAGAATGCTCTGGTATGATAGATTTGGTTCAGGATAAACATACTGAAGAGGAGTGGCTACTTCCCCATACTCTCTTGACCCCAGTCGCCTCTTATGATCATTGCTATACTCGGAGTTTAATCTGCAATAAGTCTGCCTCTTGCACAACAGCAGCGAGAAGGGTTTCACCTGATTATGATTGCAAAATGGAGGAGGAAGATCTACATGGTCAGCTTGTACAAGCAAAAGCAGATGCTGAGGCGTCAAAGCTTGAAGCATGTATGGAACTTTTGAAGCGTAAAGAATTGGAAGCTGAAGCTTTGCAGGCTATCAGGAAGATGAAAGATATTGAATCTGCTCACACTCATGAAGCTAAACTCAAGCAGGAAGCCGAAGACACCCTAAGAATCATGATGCAGGAACAAGAAAAGCTTTTGGAAGAAAGATTAGAACTTACAGGGGAGCTTCAGAAGACCATGAGGAATGTAGCTGTCCTTGACAGTCGTGTTCAGGAGGCTAATCGTCGTTGTGATGAAGCAGCTGGGGAGCTGAAATTGATCCAAATATGTAATGCAAGTCTGCGGCAAGAAAAACAGAAGATTCAAAGACAGAAAATTGAAGCTGAGCGTTGGCTTGAGAGGTGGAGAAGTCGAAGACAGACAGGCGGTACAAAACACAATGGCAACACAGGTTTCCTGGATGATGTGCCTGAGTTAGTGGAGTTCTCTTTGTTTGATCTGCAAACTGCAACATGCAATTTTTCTGGTAGCTTCAAGGTTTGTGAGGGAGGTTATGGTAGCATCTATAAGGGAGAACTGCTGAATAGAACTGTTGCCATACGGAGGCTGCCTTTACATAGCATCCAAGGCCCTTCACAATTTCAGAAAGAGGTTCAAATTTTAGGGAAGCAACGGCACCCTCATTTAGTGAACTTAATTGGTGTGTGCCCAGAGGCCTGGACCCTTGTATATGATTATGTACCAAATGGGACCCTTCAATATCGCCTTTTCCATAAAAGCAACATTGAGCCTCTTTCTTCTCATGTCCGAGCGAGAATCATCTCCGAGACATCAACAGCACTTCTATTCCTTCATTCGTCTCATCCTGAAAAGATTGTTCATGGCGACCTGAGACCTGAAAGCATCCTTTTAGATTCTGATCTACATAGTAAAATTTGTGATTTTGGAACCTCTAGATTACTTTCACTGGAGACTCTCCGTTGTTCTAGTTTCCGCTGTTATCCTGAACCTAAGGGTGCCTTCCCTTATACAGACCCAGAACTTCACAGAACAGGGAAATTGACCACAAAATCTGATCTTTACTCCTTTGGCATCATCATACTGCAGTTGCTGACTGGACAACCACCATTAGGTTTGGCTGCTTATGTTCGTAAAGCAGTGTCAGGTGGAAAGCTAGCTTCAATTCTGGATCCATCTGCAGGGGATTGGAGACCATTTGTAGCAGAGACACTTGCAGATGTGGCTTTGAGGTTCTGTGAACAGAACAGTCGAGATAGGCCAGAGTTGACACCTGCTCTTGTGAAAGACTTGCAACAGCTTCATATCCCACAAGAGCGGCCAGTGCCTTCTTACTTTTTGTGTCCTATCCTACAGGAGATCATGTGCGACCCTCAAGTAGCAGCAGATGGGTTCACTTATGAGGGAGAAGCCATTCACGAGTGGTTAGAAAATGGTCGGGAAACTTCTCCAATGACCAATTTGAGGTTGGACCACCTGCATCTAACTCCAAACCATTCATTGAGGCTGGCAATTCAAGAATGGCTTTGCAGATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4966.p1 GENE.R_Transcript_4966~~R_Transcript_4966.p1 ORF type:complete len:839 (+),score=180.95,Pkinase|PF00069.21|1.5e-31,Pkinase_Tyr|PF07714.13|3.5e-29,U-box|PF04564.11|4.1e-19 R_Transcript_4966:221-2737(+)
MEVLTPTLPPGPTVDRYSLFSASSLLRSSSRFAEIMEETRREKVYVAVGKSEEKAITLLQWTLRNFRSSEICLVHVHQPSPLIPTLLGKLPASQANGETVATYRREEREKMKKLLLSYLNICSRAKVKASIFITEAEQVQKGLLELLVEHGMEKLVMGSVPENCVKVRKSSKKANYAAKNAPAFCEILFIYKGKHVWTREALEVTTDPNCRADKLATEWLRSKSFQYSSSKPLYNRDHIQSNSSRLSTECSGMIDLVQDKHTEEEWLLPHTLLTPVASYDHCYTRSLICNKSASCTTAARRVSPDYDCKMEEEDLHGQLVQAKADAEASKLEACMELLKRKELEAEALQAIRKMKDIESAHTHEAKLKQEAEDTLRIMMQEQEKLLEERLELTGELQKTMRNVAVLDSRVQEANRRCDEAAGELKLIQICNASLRQEKQKIQRQKIEAERWLERWRSRRQTGGTKHNGNTGFLDDVPELVEFSLFDLQTATCNFSGSFKVCEGGYGSIYKGELLNRTVAIRRLPLHSIQGPSQFQKEVQILGKQRHPHLVNLIGVCPEAWTLVYDYVPNGTLQYRLFHKSNIEPLSSHVRARIISETSTALLFLHSSHPEKIVHGDLRPESILLDSDLHSKICDFGTSRLLSLETLRCSSFRCYPEPKGAFPYTDPELHRTGKLTTKSDLYSFGIIILQLLTGQPPLGLAAYVRKAVSGGKLASILDPSAGDWRPFVAETLADVALRFCEQNSRDRPELTPALVKDLQQLHIPQERPVPSYFLCPILQEIMCDPQVAADGFTYEGEAIHEWLENGRETSPMTNLRLDHLHLTPNHSLRLAIQEWLCRS*

Click here to download the sequence:
Link to NCBI Protein BLAST