Transcript Information: R_Transcript_49660.p1


Annotated TAIR IDAT1G55870.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)ATPARN, AHG2
Annotation TypeHomolog
Chromosome Positionchr1:20895663-20898359 | Forward length=689
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7654091100136
Replicate 21.8272096881272
Replicate 33.1533009032678
Condition 2: 8 Hour
Replicate 12.9445027468206
Replicate 23.927306779069
Replicate 35.0548789069432
Condition 3: 24 Hour
Replicate 16.13903389475
Replicate 23.6293463997153
Replicate 34.0173635184812


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49660.p1 GENE.R_Transcript_49660~~R_Transcript_49660.p1 ORF type:internal len:632 (+),score=104.68,CAF1|PF04857.16|3.4e-80 R_Transcript_49660:1-1893(+)
AACACAGACAGTGAAGAAGAAGAACAACAAAAGCAGCAAATGAGGAAGCTAACGAGAATAAACCCATTTTCTCTCTCATCATCACCAATACAAATACAATCCTCTTCAGTTGCCCTAATTAAAACCCTAACTTCACTATCATCCCCAACATTCTCTCTCAAAAATGTAACAAAATCAAACTTCGAAGCAGCCTTAGAAGACCTCATTCCTCAAATTAGGGCTGCCGATTTTGTGGCGGTTGACCTAGAAATGACCGGAATCACCAGTACACCGTGGCGCGAATCTTTTGAGTTCGATCGTTACGATGTTCGGTACCTTAAAGTTAAGGATTCAGCGGAGAAGTTCGCTGTTGTTCAGTTCGGTGTTTGTCCTTTTCGTTGGGACCCTCTCAAGCTCTCTTTCATTGCTCACCCGCACAATTTTTATATATTTCCTCGTCAAGAGCTTCCTGCTGATGGCCCGTCTAATGAGTTCCTGTGTCAAACAACATCCATTGACTTCTTGGCACAGTACCAATTTGATTTTAATGCCTGCATACATGAAGGAGTGTCTTATTTATCCAGAGGACAGGAATACAAGGCTTTGAAGCGCTTGAATTCAGTATATAGTGGGAAATGGCATAATATGGAGGAAGTTAGAGATGTACCATTGGTCAATGTGGCTGACATTCTTTTCTGTGAACGTATGAAGATTCGGCTAAATGAGTGGCATGATGATATACTACAAAATAGAAAAGCCACTCCTCAATTGTGTGGATATGCTGCTGAATCGAAACAACAATTTGAAACCATATTTTTTAACATGCGTCCAGCTCTTAGGCTGAATGGATTCACTTCTCATCAGTTGAAGTTGATTGAACTGAAAGTGGTGAAGGATGAGCTTCACCAACATGCAAAGGGAAAGGTAAAAGAGGCTATCGGATTCCGGCATGTTATTGACCTCTTATCTTCAGAAAAGAAATTAATTATAGGTCACAATTACTTCTTGGATATGGCTCACATGTATCACAAATTCTTTGGTCCTCTTCCGTCAACTGCTGAGTTTGCAGCAAATATTCACAACTCTTTCCCTCATATCATCGACACAAAAATACTGTTGAATGCTGACAGTGGGCTTCAAAAACTTATGAAGAAAGCCAGCACATCACTAGCCTCATCCTTTTCTCAGTTATGTCCAGGGATTGCCTCCAGAAAATCCTCAGATTTGGATGTACAGCCCTGTGTCATGGTGGAGGTCCAGGTGGATGATATGAGGTCATCCAACTGGAATTCTGGAGCAAAGCATGAAGCTGGTTATGATGCATTCATGACTGGATGTGTCTTTGCACAAGCCTGCAGTCATCTTGGTATCGATTTCCCTACCAAAAGCGTAGCCCAAATAGAGAAGCTTGAAGAGTACATCAATCTTCTTTATCTCAGTTGGAATAGTGGAGATGTGATCAACTTAAGCACAGGTGAGACAAGGGAACTTCCTAGCATCAATAATATCAGGAGGAGGTTTCTGAAGATTCTGTACCCTAACATGGTTTTGATTTGGGGATTTCCTCCAAAAGTCAATACAAGGGAGATAAGAGAGTGCGTATCTAAAGTATTTGGCATTCACTCAATTACTTCTATCTATCAATTAGATGAAACTGCAGTGTTTATTCAGTTCAGCAAGGCTGAGCTGGTTGCTGACTTTCTTACATTGAAGGAGAGACTTGAAGCAAGTAACGATTCCATTTCCGTGCTACATCCTTTGTCAAAGCTGTTAGGAGGAGGAAAAACATGTGCTGCCGGTTATGAATTTTACAAGAATATTTGCAGCTCCCCAACTTCTAAGGTCTTGTTTGCAGAACAGGCAGAGTCCTTGGGAATAAATTGGAAGACCGAAGGTATAGAATTCAAGGCAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49660.p1 GENE.R_Transcript_49660~~R_Transcript_49660.p1 ORF type:internal len:632 (+),score=104.68,CAF1|PF04857.16|3.4e-80 R_Transcript_49660:1-1893(+)
NTDSEEEEQQKQQMRKLTRINPFSLSSSPIQIQSSSVALIKTLTSLSSPTFSLKNVTKSNFEAALEDLIPQIRAADFVAVDLEMTGITSTPWRESFEFDRYDVRYLKVKDSAEKFAVVQFGVCPFRWDPLKLSFIAHPHNFYIFPRQELPADGPSNEFLCQTTSIDFLAQYQFDFNACIHEGVSYLSRGQEYKALKRLNSVYSGKWHNMEEVRDVPLVNVADILFCERMKIRLNEWHDDILQNRKATPQLCGYAAESKQQFETIFFNMRPALRLNGFTSHQLKLIELKVVKDELHQHAKGKVKEAIGFRHVIDLLSSEKKLIIGHNYFLDMAHMYHKFFGPLPSTAEFAANIHNSFPHIIDTKILLNADSGLQKLMKKASTSLASSFSQLCPGIASRKSSDLDVQPCVMVEVQVDDMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFPTKSVAQIEKLEEYINLLYLSWNSGDVINLSTGETRELPSINNIRRRFLKILYPNMVLIWGFPPKVNTREIRECVSKVFGIHSITSIYQLDETAVFIQFSKAELVADFLTLKERLEASNDSISVLHPLSKLLGGGKTCAAGYEFYKNICSSPTSKVLFAEQAESLGINWKTEGIEFKAE

Click here to download the sequence:
Link to NCBI Protein BLAST