Transcript Information: R_Transcript_49666.p1


Annotated TAIR IDAT1G55870.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)ATPARN, AHG2
Annotation TypeHomolog
Chromosome Positionchr1:20895663-20898359 | Forward length=689
E-Value2E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4765323908412
Replicate 20.79131785488561
Replicate 32.1295208318031
Condition 2: 8 Hour
Replicate 12.1532795807879
Replicate 21.1798455242837
Replicate 33.9678143818434
Condition 3: 24 Hour
Replicate 11.6151221165219
Replicate 21.6070414769516
Replicate 32.9696885756092


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49666.p1 GENE.R_Transcript_49666~~R_Transcript_49666.p1 ORF type:5prime_partial len:398 (+),score=60.09,CAF1|PF04857.16|3.4e-50 R_Transcript_49666:1-1194(+)
AACACAGACAGTGAAGAAGAAGAACAACAAAAGCAGCAAATGAGGAAGCTAACGAGAATAAACCCATTTTCTCTCTCATCATCACCAATACAAATACAATCCTCTTCAGTTGCCCTAATTAAAACCCTAACTTCACTATCATCCCCAACATTCTCTCTCAAAAATGTAACAAAATCAAACTTCGAAGCAGCCTTAGAAGACCTCATTCCTCAAATTAGGGCTGCCGATTTTGTGGCGGTTGACCTAGAAATGACCGGAATCACCAGTACACCGTGGCGCGAATCTTTTGAGTTCGATCGTTACGATGTTCGGTACCTTAAAGTTAAGGATTCAGCGGAGAAGTTCGCTGTTGTTCAGTTCGGTGTTTGTCCTTTTCGTTGGGACCCTCTCAAGCTCTCTTTCATTGCTCACCCGCACAATTTTTATATATTTCCTCGTCAAGAGCTTCCTGCTGATGGCCCGTCTAATGAGTTCCTGTGTCAAACAACATCCATTGACTTCTTGGCACAGTACCAATTTGATTTTAATGCCTGCATACATGAAGGAGTGTCTTATTTATCCAGAGGACAGGAATACAAGGCTTTGAAGCGCTTGAATTCAGTATATAGTGGGAAATGGCATAATATGGAGGAAGTTAGAGATGTACCATTGGTCAATGTGGCTGACATTCTTTTCTGTGAACGTATGAAGATTCGGCTAAATGAGTGGCATGATGATATACTACAAAATAGAAAAGCCACTCCTCAATTGTGTGGATATGCTGCTGAATCGAAACAACAATTTGAAACCATATTTTTTAACATGCGTCCAGCTCTTAGGCTGAATGGATTCACTTCTCATCAGTTGAAGTTGATTGAACTGGTCACAAGGAAACATTTTGCAGATCTCAACTTTGTCTGTGCGTATGATCAAGACTCTATTTTGAAGAAACTTGTTGTTTTTACAGAATCTGAGAATGACAGGAGTAACCTTTTGAAAGTGGTGAAGGATGAGCTTCACCAACATGCAAAGGGAAAGGTAAAAGAGGCTATCGGATTCCGGCATGTTATTGATCTCTTGTCTGCAGAAAAGAAATTAATTATATGGCTCACATGTATCACAAATTCTTTGATCCTCTTCCGTCAACTGCTGAGGAGTTTGCAGCAAATATTCACAACTCTTTCCCTCATATCATCGACACAAAAATACTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49666.p1 GENE.R_Transcript_49666~~R_Transcript_49666.p1 ORF type:5prime_partial len:398 (+),score=60.09,CAF1|PF04857.16|3.4e-50 R_Transcript_49666:1-1194(+)
NTDSEEEEQQKQQMRKLTRINPFSLSSSPIQIQSSSVALIKTLTSLSSPTFSLKNVTKSNFEAALEDLIPQIRAADFVAVDLEMTGITSTPWRESFEFDRYDVRYLKVKDSAEKFAVVQFGVCPFRWDPLKLSFIAHPHNFYIFPRQELPADGPSNEFLCQTTSIDFLAQYQFDFNACIHEGVSYLSRGQEYKALKRLNSVYSGKWHNMEEVRDVPLVNVADILFCERMKIRLNEWHDDILQNRKATPQLCGYAAESKQQFETIFFNMRPALRLNGFTSHQLKLIELVTRKHFADLNFVCAYDQDSILKKLVVFTESENDRSNLLKVVKDELHQHAKGKVKEAIGFRHVIDLLSAEKKLIIWLTCITNSLILFRQLLRSLQQIFTTLSLISSTQKYC*

Click here to download the sequence:
Link to NCBI Protein BLAST