Transcript Information: R_Transcript_49767.p1


Annotated TAIR IDAT2G39940.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)COI1
Annotation TypeOrtholog
Chromosome Positionchr2:16672848-16675486 | Reverse length=592
E-Value2.5E-253
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 152.316805755292
Replicate 236.590465219483
Replicate 342.15939869755
Condition 2: 8 Hour
Replicate 129.147839233942
Replicate 236.782308208743
Replicate 337.704288955898
Condition 3: 24 Hour
Replicate 137.134154743954
Replicate 227.994668231607
Replicate 336.942541015278


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49767.p1 GENE.R_Transcript_49767~~R_Transcript_49767.p1 ORF type:complete len:583 (+),score=84.03 R_Transcript_49767:440-2188(+)
ATGGCGAACAATATAAGAACGATGTCAGACGAAATACTAGAGTGCATACTACCGTACATCCAAGATCCTAAAGACAGATCATCGATTTCATCAGTATGTAGGAGCTGGTACGAGCTAGATCGTCTAACAAGACGCCACGTCACCATAGCACTATGTTACACAACAACGCCAGCGAGGCTACACGATAGGTTTCCGAACATAGAATCCTTGATAATGAAAGGAAAACCTAGGGCTGCTATGTTCAATTTGATACCAGAAAATTGGGGAGGTTATGTGCAGCCTTGGGTTAATATTCTAGGTTTATTTCCTCGTCTTCATTCGCTTCATTTTCGTCGTATGATTGTTACTGATTCAGATCTTGAGACTATTGCTGCCGTCAAAGGCCGTGTTCTTCGATCTTTGAAGCTTGATAAGTGTTCTGGTTTCTCTACTGATGGTCTTGAACATATCACCCGCTCTTGCAGGAGTATGCAGACACTGTTTTTGGAAGATAGTAACAGTATCGAGGAGAGAAGTGGCGAATGGTTTCACCAGCTGGCTTTGAACAATGTGGTTCTTGAAACACTGAATTTATACTTGACTTTTCTGGAAAAAATCAGAGTTGAAGATCTTGAACTTATTGCCAGAAATTGCCCTTTAGTCTCTCTCAAAATTGGTGATACTGACCTTGTCCATCTTGTGAATGTCTTCCGTTCAGCAACAACATTGCAAGAATTCGGTGGGGGCTCATTTAGTGAAGGATTTGATCAATATGTGGAAATTGTATTTCCTCCCCAATTGACTTCTGTTGGTCTTATGTTCTTGGAGAGAAGCCATGCGCCTATACTTTTTCCTATTGCACACAGTTTGAAGAAGCTGGATCTTGTTTATGCGTCACTTAGTGGTGAGGGCCACTGTGAGCTTATATGTAGATGCCCCAATTTAGAAGTGCTAGAGACCACAAATGTAATAGGTGATCAGGGTATGGAGGTGGTATCAAAAACATGTAAGAGATTAAAGAGGCTACGTGTTGAACGAGGTGCAGATGATCAATTCATTGGTGATGAACCTGGTGCTGTTACGCAACAGGGATTGATAGCTGTGGCACAGGGTTGCCCTCTGCTGATATACCTTGCTGTTTATGTGTCTGATATAACAAATGAAGCTCTAGAACATATAGGTGCAAAGTTGAAAAATCTCAACGACTTCCGACTTGTCTTGCTCGACAGAGAGGAGACGATTACCGATTTGCCTCTGGACAATGGAGTTCGAGCTCTTCTACAAGGTTGTCAGAACATGCAAAGATTTGCATTGTATCTTAGACAGGGAGGCTTGACTGATGTGGGTCTCAGTTACATTGGGCAGTTCAGTCGAAATGTGAGGTGGATGCTTTTAGGTGTTGTTGGAGAAACTGATGCAGGACTACTGGAATTCTCTAGGGGCTGCCCTAGCCTAGAAAAACTTGAAATGAGGGCCTGTTGCTTTACAGAGCGTGCAATTGCTGTTGCTGCTACACGGCTTGCTTCTCTGAGGTACATATGGGTCCAAGGATACAGAGCATCACATATGGGTATGGTTGATCTCCTGGAAATGGCTCGCCCATTCTGGAACATAGAGCTTATTCCCGGGGACCAGTACAACGTCAATGGAGATAATGGCCAACCTGTAAGGGTTGATTATCCATCCCACATTATAGCATATTACTCGCTTGCTGGACAGAGATCAGATCACCCAGAAACTGTCTACCCTTTGGCCTTACCTGAGCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49767.p1 GENE.R_Transcript_49767~~R_Transcript_49767.p1 ORF type:complete len:583 (+),score=84.03 R_Transcript_49767:440-2188(+)
MANNIRTMSDEILECILPYIQDPKDRSSISSVCRSWYELDRLTRRHVTIALCYTTTPARLHDRFPNIESLIMKGKPRAAMFNLIPENWGGYVQPWVNILGLFPRLHSLHFRRMIVTDSDLETIAAVKGRVLRSLKLDKCSGFSTDGLEHITRSCRSMQTLFLEDSNSIEERSGEWFHQLALNNVVLETLNLYLTFLEKIRVEDLELIARNCPLVSLKIGDTDLVHLVNVFRSATTLQEFGGGSFSEGFDQYVEIVFPPQLTSVGLMFLERSHAPILFPIAHSLKKLDLVYASLSGEGHCELICRCPNLEVLETTNVIGDQGMEVVSKTCKRLKRLRVERGADDQFIGDEPGAVTQQGLIAVAQGCPLLIYLAVYVSDITNEALEHIGAKLKNLNDFRLVLLDREETITDLPLDNGVRALLQGCQNMQRFALYLRQGGLTDVGLSYIGQFSRNVRWMLLGVVGETDAGLLEFSRGCPSLEKLEMRACCFTERAIAVAATRLASLRYIWVQGYRASHMGMVDLLEMARPFWNIELIPGDQYNVNGDNGQPVRVDYPSHIIAYYSLAGQRSDHPETVYPLALPEH*

Click here to download the sequence:
Link to NCBI Protein BLAST