Transcript Information: R_Transcript_49789.p1


Annotated TAIR IDAT5G16290.1
Annotated Gene NameVALINE-TOLERANT 1
Annotated Gene Symbol(s)VAT1
Annotation TypeOrtholog
Chromosome Positionchr5:5333874-5337387 | Forward length=477
E-Value1.7E-223
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.247135155132
Replicate 27.5638846220204
Replicate 310.860544326126
Condition 2: 8 Hour
Replicate 111.558544944041
Replicate 211.805434512427
Replicate 313.228502978005
Condition 3: 24 Hour
Replicate 115.495331586401
Replicate 214.109886122543
Replicate 315.724707093899


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49789.p1 GENE.R_Transcript_49789~~R_Transcript_49789.p1 ORF type:complete len:483 (+),score=106.17,ALS_ss_C|PF10369.5|1.1e+03,ALS_ss_C|PF10369.5|8.6e-26,ALS_ss_C|PF10369.5|7.4e-26,ACT_5|PF13710.2|3.9e-10,ACT_5|PF13710.2|1e-10,ACT|PF01842.21|1.2e-09,ACT|PF01842.21|7.2e+03,ACT|PF01842.21|2.5e-10,ACT_4|PF13291.2|6.2e-06,ACT_4|PF13291.2|0.042,ACT_4|PF13291.2|1.4e+04 R_Transcript_49789:229-1677(+)
ATGGCGGCGATGTCATTCTGTGCCAATGGCGGAAAGACCCGAACCCATTTAACCCGACCCAAATTGGGATATGGGTTTCGCAGGAAACTGGATTTTGTAGCTCCTAGTACTACAATTCCAATGGCGAAACCAAGGTTGAAAAATTCAGGGTTTAAGGCAATGGAGGTTTCTGCTACTGCTAATGGTGCTGTTACTGCTGTTCCTCTCACTGCCCGTCCTGGGGTGAAGCGGCACACAATATCAGTATTTGTAGGGGATGAAAGTGGGATTATCAATAGAATTGCAGGTGTTATTTCTAGGAGAGGGTACAACATAGAATCGCTGGCAGTTGGTTTAAACAAAGACAAGGCTCTGTTCACTATCGTAGTGTGTGGTACTGAAAAGGTGTTGCACCAAGTTATGGAGCAGCTTAGCAAGCTTGTAAATGTCTTGAAGGTCGAAGATCTGTCAAGAGAACCACAAGTGGAACGTGAGCTGATGCTCATAAAGCTCAATGCAGATACAAATACCCATGCTGAGATGATGTGGCTGGTGGACATCTTCAGAGCAAAAATTGTGGACGTCTCAGAGAACTTGGTCACTGTCGAGGTGACTGGGGATCCTGGAAAGATGGCTGCTGTCCTGAGAAATTTCAGCAAGTTTGGGATCAAAGAAATTGCCAGGACGGGAAAGATTGCTTTAAAACGAGAAAGGATTGGTGAAACGGCTCCTTTTTGGAGATTTTCTGCTGCTTCTTATCCAGATTTGGAAGAGAAAATTCCTGCCAGGTCTCCTGTAGAGCCTACAAGAAGCAGCATCAATGGTGCCCTTAGTACATCAAGTGAGGGTGATGTTTATCCAGTGGAGCCTTACGATAGCTTCATGGTAAATCAAGTACTTGATGCTCACTGGGGTGTCCTTAATGATGAAGATTCAAGTGGGCTTCGGTCACATACATTGTCTATGCTTGTAAATAACACTCCTGGGGTTCTCAATGTTGTTACGGGGATAATTTCGCGGAGGGGCTATAATATTCAGAGTCTCGCTGTTGGACCTGCTGAAAAAGAGGGTCTTTCTCGCATTACGACAGTGGTTCCTGGAACTGATGAATCAATTGGAAAGTTGGTTCAGCAACTTCACAAGTTAGTAGACCTTCATGAGGTTGAGGATCTTACTCACCTGCCATTTGCTGAGCGAGAGTTGATGTTGATCAAAGTAGCTGCAAACACTGCTGCCAGAAGGGATGTCCTTGATGTTGTTAATATTTTCCGGGCTAAAACCGTAGACGTTTCTGATCATACCATAACCCTACAGGTTAGTGGTGATATAGACAAAATGGTTGCATTGCAGAGGCTACTGGAGCCATATGGCATTTGTGAGGTGGCACGGACAGGAAGAGTGGCACTGGCTCGAGAGTCAGGAGTAGATTCCAAATATTTGCGCGGATATGCCCTTCCCTTGTGTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49789.p1 GENE.R_Transcript_49789~~R_Transcript_49789.p1 ORF type:complete len:483 (+),score=106.17,ALS_ss_C|PF10369.5|1.1e+03,ALS_ss_C|PF10369.5|8.6e-26,ALS_ss_C|PF10369.5|7.4e-26,ACT_5|PF13710.2|3.9e-10,ACT_5|PF13710.2|1e-10,ACT|PF01842.21|1.2e-09,ACT|PF01842.21|7.2e+03,ACT|PF01842.21|2.5e-10,ACT_4|PF13291.2|6.2e-06,ACT_4|PF13291.2|0.042,ACT_4|PF13291.2|1.4e+04 R_Transcript_49789:229-1677(+)
MAAMSFCANGGKTRTHLTRPKLGYGFRRKLDFVAPSTTIPMAKPRLKNSGFKAMEVSATANGAVTAVPLTARPGVKRHTISVFVGDESGIINRIAGVISRRGYNIESLAVGLNKDKALFTIVVCGTEKVLHQVMEQLSKLVNVLKVEDLSREPQVERELMLIKLNADTNTHAEMMWLVDIFRAKIVDVSENLVTVEVTGDPGKMAAVLRNFSKFGIKEIARTGKIALKRERIGETAPFWRFSAASYPDLEEKIPARSPVEPTRSSINGALSTSSEGDVYPVEPYDSFMVNQVLDAHWGVLNDEDSSGLRSHTLSMLVNNTPGVLNVVTGIISRRGYNIQSLAVGPAEKEGLSRITTVVPGTDESIGKLVQQLHKLVDLHEVEDLTHLPFAERELMLIKVAANTAARRDVLDVVNIFRAKTVDVSDHTITLQVSGDIDKMVALQRLLEPYGICEVARTGRVALARESGVDSKYLRGYALPLCD*

Click here to download the sequence:
Link to NCBI Protein BLAST