Transcript Information: R_Transcript_49794.p1


Annotated TAIR IDAT3G20290.1
Annotated Gene NameEPS15 Homology domain 1
Annotated Gene Symbol(s)ATEHD1, EHD1
Annotation TypeOrtholog
Chromosome Positionchr3:7075057-7078655 | Reverse length=545
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.969615643553
Replicate 234.455467349822
Replicate 338.177895993587
Condition 2: 8 Hour
Replicate 132.244206771189
Replicate 236.121424512684
Replicate 348.80323148485
Condition 3: 24 Hour
Replicate 142.383644112685
Replicate 238.495717440879
Replicate 346.661700101737


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49794.p1 GENE.R_Transcript_49794~~R_Transcript_49794.p1 ORF type:complete len:546 (+),score=116.45,EHD_N|PF16880.1|5.3e-16,Dynamin_N|PF00350.19|1.2e-10,EF-hand_7|PF13499.2|0.0011,EF-hand_7|PF13499.2|2.5e-06,EF-hand_7|PF13499.2|3.7,EF-hand_7|PF13499.2|1e+04,EF-hand_4|PF12763.3|1.6e-08,EF-hand_4|PF12763.3|1.1e+04,EF-hand_1|PF00036.28|0.07,EF-hand_1|PF00036.28|0.0031,EF-hand_1|PF00036.28|8e+03,MMR_HSR1|PF01926.19|1.5e-06 R_Transcript_49794:301-1938(+)
ATGGAGATAGCTACTGGCCCAATCGCTTCATGCTCCAAAGAACACCAGAAGATTTATCAGCAATGGTTTTCTTGTGCAGATTCTGATGGAGATGGGCGTATAACTGGGAATGATGCTACCAAGTTCTTCGCCATGTCGAACTTGTCACGATCTGACCTCAAGCAGGTTTGGGCACTCGCTGATACTAAAAGACAAGGGTACTTGGGTTTTAAGGAGTTTGTTGCAGCAATGCAGCTTATTTCCCTGGCGCAAGCTGGACATGAACTTACACCTGATCTCCTTAGTAGTGGAGTTGATAGAGAGGAGATCCAACTTCCAGTCATGGAAGGGTTAGATACATTATTAGCGAAGAAGAAGACAGTTACAACATATGTTCCACCTGAAGCAAATGGATCTCCTCAGCGGCCATCCGCGGCATCTGCAAATTGGTTTGGTTCAAAATCATCAAAGAAGGTTCCCCTCAGTGCTGTAACATCCATAATTGATGGTTTGAAGAGGCTTTACATTGAAAAGCTAAAGCCACTAGAGACTACCTACCGCTTTCACGACTTTGTGTCACCTGCACTGACAAATAGTGATTTTGATGCCAAACCCATGGTTATGCTATTGGGGCAATATTCAACAGGGAAAACAACATTCATTAAACATCTACTGAAATGTGAATATCCAGGAGCACATATTGGACCCGAGCCTACAACAGACCGTTTTGTTGTCGTCATGTCTGGACCTGATGAGAGGAGTATTCCAGGAAACACTATTGCTGTTCAAGCAGACATGCCATTCAGCGGTCTAACAAACTTTGGAGGGGCATTCTTATCCAAATTCCAATGTTCACAAATGCCACATCCTCTGCTGGAGCACATCACTTTTGTTGACACTCCTGGGGTTCTCTCTGGTGAGAAGCAGAGAACTCAGAGAAGCTATGATTTTACTGGGGTTATATCATGGTTTGCGGCAAAGTGTGACCTTATTCTTCTCTTGTTTGATCCCCACAAGCTTGACATTAGTGATGAATTCAAGCGGGTGATTTCAGCTCTACGCGGTCATGATGACAAAATACGCGTTGTTCTGAACAAGGCTGATCAAGTTGATACCCAGCAGTTAATGAGAGTGTATGGTGCACTGATGTGGTCACTTGGGAAGTGCCTAAATACCCCTGAGGTGGTTCGTGTTTATATTGGTTCGTTTAATGATAAACCCATCAACGAAGAAGCAGTTGGCCCAATGGGGAAGGATCTTTTTGAGAAAGAGCAGAATGATCTTCTTGCTGACTTGAAAGATATCCCAAAGAAAGCTTGTGATAGACGGATCAATGAATTTGTCAAGCGTGCTAGAGCAGCTAAGATTCATGCATATATTATCAGTCATCTTAAGAAGGAGATGCCTGCCATGATTGGGAAGAATAAAGCTCAACAACGCTTAATTGATAATCTGGAGGATGAATTTGCTAAGGTTCAAAGAGAATTTCATTTACCAGCAGGCGATTTTCCATATGTGGAGCATTTTAGGGAAGTTCTAGGTGGCTATAGTATTGACAAGTTTGAGAAGCTGAAGCCAAAGATGATACAAGCTGTTGATGACATGCTTGGCTATGATATCCCGGATCTACTAACTAAATTCAGAAATCCATATGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49794.p1 GENE.R_Transcript_49794~~R_Transcript_49794.p1 ORF type:complete len:546 (+),score=116.45,EHD_N|PF16880.1|5.3e-16,Dynamin_N|PF00350.19|1.2e-10,EF-hand_7|PF13499.2|0.0011,EF-hand_7|PF13499.2|2.5e-06,EF-hand_7|PF13499.2|3.7,EF-hand_7|PF13499.2|1e+04,EF-hand_4|PF12763.3|1.6e-08,EF-hand_4|PF12763.3|1.1e+04,EF-hand_1|PF00036.28|0.07,EF-hand_1|PF00036.28|0.0031,EF-hand_1|PF00036.28|8e+03,MMR_HSR1|PF01926.19|1.5e-06 R_Transcript_49794:301-1938(+)
MEIATGPIASCSKEHQKIYQQWFSCADSDGDGRITGNDATKFFAMSNLSRSDLKQVWALADTKRQGYLGFKEFVAAMQLISLAQAGHELTPDLLSSGVDREEIQLPVMEGLDTLLAKKKTVTTYVPPEANGSPQRPSAASANWFGSKSSKKVPLSAVTSIIDGLKRLYIEKLKPLETTYRFHDFVSPALTNSDFDAKPMVMLLGQYSTGKTTFIKHLLKCEYPGAHIGPEPTTDRFVVVMSGPDERSIPGNTIAVQADMPFSGLTNFGGAFLSKFQCSQMPHPLLEHITFVDTPGVLSGEKQRTQRSYDFTGVISWFAAKCDLILLLFDPHKLDISDEFKRVISALRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKCLNTPEVVRVYIGSFNDKPINEEAVGPMGKDLFEKEQNDLLADLKDIPKKACDRRINEFVKRARAAKIHAYIISHLKKEMPAMIGKNKAQQRLIDNLEDEFAKVQREFHLPAGDFPYVEHFREVLGGYSIDKFEKLKPKMIQAVDDMLGYDIPDLLTKFRNPYD*

Click here to download the sequence:
Link to NCBI Protein BLAST