Transcript Information: R_Transcript_49804.p1


Annotated TAIR IDAT3G01130.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:44714-45522 | Reverse length=53
E-Value9.1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 181.177642140723
Replicate 295.956776463959
Replicate 393.234440742234
Condition 2: 8 Hour
Replicate 171.524500240637
Replicate 264.140424228664
Replicate 370.69574662677
Condition 3: 24 Hour
Replicate 195.456145841506
Replicate 2104.85921332187
Replicate 392.15875657641


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49804.p1 GENE.R_Transcript_49804~~R_Transcript_49804.p1 ORF type:5prime_partial len:114 (+),score=22.06 R_Transcript_49804:3-344(+)
AAAATTAAAGTGGACCCTTGCACAAGCAACTGCCCAAACTCTCTCTTCTTCGCTCCTTCCGGTCATTGTCTTTCTCTCTCAAAAAATCCTAGGGTTTTTATTTTTCATTTTAATTTTAATTCCTCTCTCACAGTCTCAGATTCTCTCTCTCATTCTCTGAATCTCAGATCGGAAGAAATGGCACCAGCTCTACCTCAGTTCTACAGTGGCACCAGCACTCTCGCTTTGGTTGCTCGTGTATCGGCTTTCACTGCTGGGATGGTCTATGGCAACATGAAGCTCAAAGTTCTCAAGATGAAGGCCAAGTCTCACCAGAAAGCTGATGCCAAGGGTCAACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49804.p1 GENE.R_Transcript_49804~~R_Transcript_49804.p1 ORF type:5prime_partial len:114 (+),score=22.06 R_Transcript_49804:3-344(+)
KIKVDPCTSNCPNSLFFAPSGHCLSLSKNPRVFIFHFNFNSSLTVSDSLSHSLNLRSEEMAPALPQFYSGTSTLALVARVSAFTAGMVYGNMKLKVLKMKAKSHQKADAKGQH*

Click here to download the sequence:
Link to NCBI Protein BLAST