Transcript Information: R_Transcript_49805.p1


Annotated TAIR IDAT5G15320.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4977647-4978658 | Forward length=53
E-Value8.9E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1111.68337126531
Replicate 2125.44399824992
Replicate 3127.73418083278
Condition 2: 8 Hour
Replicate 192.548269207384
Replicate 290.770020355321
Replicate 398.449413534302
Condition 3: 24 Hour
Replicate 1108.95230548741
Replicate 2110.27629445289
Replicate 3107.21265516124


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49805.p1 GENE.R_Transcript_49805~~R_Transcript_49805.p1 ORF type:5prime_partial len:118 (+),score=25.61 R_Transcript_49805:1-354(+)
CTAAAATTAAAGTGGACCCTTGCACAAGCAACTGCCCAAACTCTCTCTTCTTCGCTCCTTCCGGTCATCGTCTTTCTCCCTCCAAAAATCCTAGGGTTTTTCATTTTACATTTTAATTTCTCTCTCACAGTCTCAGATTCTCTCTCTCATTCTCTGAATCTCAGATCGGAAGAAATGGCACCAGCTCTACCTCAGTTCTACAGTGGCACCAGCACTCTCGCTTTGGTTGCTCGTGTATCGGCTTTCACTGCTGGGATGGTCTATGGCAACATGAAGCTCAAAGTTCTCAAGATGAAGGCCAAGTCTCACCAGAAAGCTGAAGCCAAGAAAGCTGCTGCCAAGGGTCACCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49805.p1 GENE.R_Transcript_49805~~R_Transcript_49805.p1 ORF type:5prime_partial len:118 (+),score=25.61 R_Transcript_49805:1-354(+)
LKLKWTLAQATAQTLSSSLLPVIVFLPPKILGFFILHFNFSLTVSDSLSHSLNLRSEEMAPALPQFYSGTSTLALVARVSAFTAGMVYGNMKLKVLKMKAKSHQKAEAKKAAAKGHH*

Click here to download the sequence:
Link to NCBI Protein BLAST