Transcript Information: R_Transcript_49820.p1


Annotated TAIR IDAT5G22120.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:7334612-7336755 | Reverse length=383
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2021205075612
Replicate 23.4742079825529
Replicate 35.9326802407301
Condition 2: 8 Hour
Replicate 13.6993033373536
Replicate 28.6869612908203
Replicate 37.7046404791571
Condition 3: 24 Hour
Replicate 13.1381175347221
Replicate 25.5534824544619
Replicate 37.2434130618509


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49820.p1 GENE.R_Transcript_49820~~R_Transcript_49820.p1 ORF type:5prime_partial len:139 (+),score=13.14 R_Transcript_49820:3-419(+)
GCAATTAGCGCCAGGCCCGTTACATATATTCTCCCAAACTTATTTTCGTTGCTCGAATTGCAGAGCTTTGAAGAAAACAAAAAAACACCCAAGAAAATGGAGGGGGAAGTTGAGAATAACTGGAGTGAGAAAGTGGAAGACCTGGTAGACTCAGGCGACACTGATGCTGCAATCTCTCTCCTCGAAACCCTAATCTCAAACCTCCAAACGCTAAATACTCCCGATTCACAGCGTCAATTAGCTTCAGCGCTCTTCGAATTGTCCAAACTTTACTCTTCCAAAGGCCTCTCTCTCAAATCCGATGATGCTCGCTCTCGCGCTTCCGCCATTCATCTTCGCTCTCTCCATCCTCAGTATTTCTGTCCTTTCTTGCCTTTCTTTTTTGAATTCTTGATATTTTTTGAACTGTTATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49820.p1 GENE.R_Transcript_49820~~R_Transcript_49820.p1 ORF type:5prime_partial len:139 (+),score=13.14 R_Transcript_49820:3-419(+)
AISARPVTYILPNLFSLLELQSFEENKKTPKKMEGEVENNWSEKVEDLVDSGDTDAAISLLETLISNLQTLNTPDSQRQLASALFELSKLYSSKGLSLKSDDARSRASAIHLRSLHPQYFCPFLPFFFEFLIFFELLS*

Click here to download the sequence:
Link to NCBI Protein BLAST