Transcript Information: R_Transcript_49825.p2


Annotated TAIR IDAT5G22120.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:7334612-7336755 | Reverse length=383
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53060933007903
Replicate 20.85450059833771
Replicate 30.79907224172625
Condition 2: 8 Hour
Replicate 10.99651775948091
Replicate 20.26001025396727
Replicate 31.2663914386316
Condition 3: 24 Hour
Replicate 13.2034149620052
Replicate 21.410510743002
Replicate 30.89077867911791


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49825.p2 GENE.R_Transcript_49825~~R_Transcript_49825.p2 ORF type:5prime_partial len:172 (+),score=16.13 R_Transcript_49825:3-518(+)
GCAATTAGCGCCAGGCCCGTTACATATATTCTCCCAAACTTATTTTCGTTGCTCGAATTGCAGAGCTTTGAAGAAAACAAAAAAACACCCAAGAAAATGGAGGGGGAAGTTGAGAATAACTGGAGTGAGAAAGTGGAAGACCTGGTAGACTCAGGCGACACTGATGCTGCAATCTCTCTCCTCGAAACCCTAATCTCAAACCTCCAAACGCTAAATACTCCCGATTCACAGCGTCAATTAGCTTCAGCGCTCTTCGAATTGTCCAAACTTTACTCTTCCAAAGGCCTCTCTCTCAAATCCGATGATGCTCGCTCTCGCGCTTCCGCCATTCATCTTCGCTCTCTCCATCCGGAGATTTCATCCAAACAAGAATCTAGGTCTTCTACTAGTGAATCTTTGCCTGCCAGTGGTTCGACCAGCGCCACTAATGACGGTGAGTTGAGGGTTTTCAAATTTTTCTATGATCAATTGATTTATTTTATAGATGTCAAAAAATGTGTTTTCATTCGATTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49825.p2 GENE.R_Transcript_49825~~R_Transcript_49825.p2 ORF type:5prime_partial len:172 (+),score=16.13 R_Transcript_49825:3-518(+)
AISARPVTYILPNLFSLLELQSFEENKKTPKKMEGEVENNWSEKVEDLVDSGDTDAAISLLETLISNLQTLNTPDSQRQLASALFELSKLYSSKGLSLKSDDARSRASAIHLRSLHPEISSKQESRSSTSESLPASGSTSATNDGELRVFKFFYDQLIYFIDVKKCVFIRF*

Click here to download the sequence:
Link to NCBI Protein BLAST