Transcript Information: R_Transcript_4987.p2


Annotated TAIR IDAT3G18520.2
Annotated Gene Namehistone deacetylase 15
Annotated Gene Symbol(s)HDA15, ATHDA15
Annotation TypeHomolog
Chromosome Positionchr3:6361605-6365399 | Forward length=564
E-Value9E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2476577764474
Replicate 23.5228691973654
Replicate 34.9195678058851
Condition 2: 8 Hour
Replicate 14.4370359300377
Replicate 24.202044909753
Replicate 34.3856240425096
Condition 3: 24 Hour
Replicate 15.2386942667244
Replicate 24.4406561524652
Replicate 34.7007151005417


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4987.p2 GENE.R_Transcript_4987~~R_Transcript_4987.p2 ORF type:complete len:149 (+),score=29.65 R_Transcript_4987:303-749(+)
ATGATACCGGAAGCAGTTGATTTGGGTTGTTCAGTGAATAGAATGACAGAAACTTTGTGTCAAATTGGAGGTAATGGTATAGCATGTGAGGACCTTAATGGAAAGCGAGAGAATGTTGCGAGTTCCTGCCATTGTTCTCATTCGAAGAGCAGGGAAGGAAATACTTCAGCTATTACGACTGAAGGCATTCCCATTGCTAAATGCAAAAAGGCTAGGCTCCAGAAAGAGTTAACACTGGAAGATATATACAACAATCCAGATGACTTGGACGATGATGAAGACGACAGTGATTGGGAACCTTTTCGGAAGCCTTTGGTGGTTGAAAAGTGGTTTTGTACCAACTGTACAATGGTTAACATTGAAGGTTTTGTCTTATGTGAGTCTTGTAAGGAGCACAAGGAATCTGAAATGCTTAAGCATGGTTTTTTTGCTTCATCGGTGCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4987.p2 GENE.R_Transcript_4987~~R_Transcript_4987.p2 ORF type:complete len:149 (+),score=29.65 R_Transcript_4987:303-749(+)
MIPEAVDLGCSVNRMTETLCQIGGNGIACEDLNGKRENVASSCHCSHSKSREGNTSAITTEGIPIAKCKKARLQKELTLEDIYNNPDDLDDDEDDSDWEPFRKPLVVEKWFCTNCTMVNIEGFVLCESCKEHKESEMLKHGFFASSVL*

Click here to download the sequence:
Link to NCBI Protein BLAST