Transcript Information: R_Transcript_49898.p1


Annotated TAIR IDAT5G02130.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)NDP1
Annotation TypeOrtholog
Chromosome Positionchr5:419747-421958 | Reverse length=420
E-Value5.4E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.269829745461
Replicate 224.835353088353
Replicate 332.731297738972
Condition 2: 8 Hour
Replicate 130.068421063886
Replicate 239.522732464217
Replicate 349.742788472121
Condition 3: 24 Hour
Replicate 145.760143977568
Replicate 237.688106050038
Replicate 341.156790077168


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49898.p1 GENE.R_Transcript_49898~~R_Transcript_49898.p1 ORF type:complete len:443 (+),score=108.36,TPR_12|PF13424.2|0.87,TPR_12|PF13424.2|2.2e+03,TPR_12|PF13424.2|2.5,TPR_12|PF13424.2|1.4e-06,TPR_12|PF13424.2|1.2e+03,TPR_8|PF13181.2|3.1,TPR_8|PF13181.2|81,TPR_8|PF13181.2|1.7,TPR_8|PF13181.2|6.8,TPR_8|PF13181.2|1.4e+03,TPR_14|PF13428.2|3.3e+03,TPR_14|PF13428.2|0.75,TPR_14|PF13428.2|14,TPR_14|PF13428.2|0.12,TPR_14|PF13428.2|2.4e+02,TPR_14|PF13428.2|4.3e+03,TPR_10|PF13374.2|36,TPR_10|PF13374.2|82,TPR_10|PF13374.2|0.00051,TPR_10|PF13374.2|6.7e+03,TPR_7|PF13176.2|2e+03,TPR_7|PF13176.2|88,TPR_7|PF13176.2|3.3e+02,TPR_7|PF13176.2|0.068,TPR_7|PF13176.2|27,TPR_7|PF13176.2|2.2e+03 R_Transcript_49898:457-1785(+)
ATGTTCCGTGCAGCTCTTACTAAGCTGCTTCCCAAATCCACCGGAACTACTAATGGGGCTTTTCTTCTACGCCGTGCAGTACAGCCATCACCAGCTACAGGTCTCAAGATACAGAGATTCTACTCACCAAATCCATTAGCAAATGTCAACCCAGTTGCCCTTCAGATGATCAATTATGCTCTTGGCCTTGCTCGCTCCCAGAATACTGATGAATCATATGCACAAGCTATGCTGGTACTAGAGCAGGGTTTGACTTCTCAATCACATGAAGAGACGGATTCCAGTACTGAGAATTCAAAGGCCATGGTTTTTCTTGCTATTTCTAGTTTACTTTCTGAAAGAGGAAATACTGATGAAGCAATGCAAGCATTATTGCGGATACAGGATCTAACCAGCTCTTCTTTAGGTGTTAGAGTTGCTGCAATGGAAGCGCTTGTTGGCCTTAATTTAGAACTTGGGCTGGATGATACCTCATCAGTGCTCGCTGATAAATGCTTAAACCTATTGGAGAAGGAAGCCCCACAGAATGGAGAAGAATATGGCTATAAAGTTTTTAGCGCACGATCTAAAGCAGTTAAAGGTTTGGTTCAGCTAGTCCAAGGTGACATGGAATCAGCCAAGGTCTTTTTTGAAGGATGTCAAGATGGAGGCTGCACGGGCAATGCAGCTTTATCATATGGAGAGTTCTTGCATGCCAAGCGTGATTTCACTGCAGCTAAAGAGATATATCAGAAGGTGATTGCTGATACATCTGAGAAGAAGGATTTCAGTGACCCATATGCCTTGGGAGCATGTAATATGGCACCTGAAGAAGTCCTTTTGGCAGCCACCTGTTCTTTGGGGCAGCTAGAGTCACATTTGGGGAACTTTGGAGATGCGGAAGAGATACTCACTAGAGCTTTAAAGAAAGCAGAAGAACGTTTTGGTACACACCACCCCAAGGTTGGGACTGTGTTAACGTGCATAGCTCTCATGTACAGGCAGAAGGCTATGGCAGAGCGCTCAAGTTCTCTGTTGATTCAGGAGGGTCTCTACAGAAAGGCTATTGATTTGCTAAAGGCACCTGCACTGGAGACAGATGATGCGAATGGGAGTGTAGAGAAACAAACACAAAATGTTGAGAGACGGGACATAGTCGCTCTTGCACGAGGAGGGTATGCTGAAGCACTCGGTGTCCAAGAAAACAGAAAGGCCGAAGGAGAAAGAATGAAGAAGTGGGCAGAGGCTGCATGGAGAAACCGTCGTCTATCACTGGCTGAAGCACTAGATATCTCGGAGTCTTCTTCCAAAGTCCCAGTCGTTGATGCTCGAATTTGCAGGGCCCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49898.p1 GENE.R_Transcript_49898~~R_Transcript_49898.p1 ORF type:complete len:443 (+),score=108.36,TPR_12|PF13424.2|0.87,TPR_12|PF13424.2|2.2e+03,TPR_12|PF13424.2|2.5,TPR_12|PF13424.2|1.4e-06,TPR_12|PF13424.2|1.2e+03,TPR_8|PF13181.2|3.1,TPR_8|PF13181.2|81,TPR_8|PF13181.2|1.7,TPR_8|PF13181.2|6.8,TPR_8|PF13181.2|1.4e+03,TPR_14|PF13428.2|3.3e+03,TPR_14|PF13428.2|0.75,TPR_14|PF13428.2|14,TPR_14|PF13428.2|0.12,TPR_14|PF13428.2|2.4e+02,TPR_14|PF13428.2|4.3e+03,TPR_10|PF13374.2|36,TPR_10|PF13374.2|82,TPR_10|PF13374.2|0.00051,TPR_10|PF13374.2|6.7e+03,TPR_7|PF13176.2|2e+03,TPR_7|PF13176.2|88,TPR_7|PF13176.2|3.3e+02,TPR_7|PF13176.2|0.068,TPR_7|PF13176.2|27,TPR_7|PF13176.2|2.2e+03 R_Transcript_49898:457-1785(+)
MFRAALTKLLPKSTGTTNGAFLLRRAVQPSPATGLKIQRFYSPNPLANVNPVALQMINYALGLARSQNTDESYAQAMLVLEQGLTSQSHEETDSSTENSKAMVFLAISSLLSERGNTDEAMQALLRIQDLTSSSLGVRVAAMEALVGLNLELGLDDTSSVLADKCLNLLEKEAPQNGEEYGYKVFSARSKAVKGLVQLVQGDMESAKVFFEGCQDGGCTGNAALSYGEFLHAKRDFTAAKEIYQKVIADTSEKKDFSDPYALGACNMAPEEVLLAATCSLGQLESHLGNFGDAEEILTRALKKAEERFGTHHPKVGTVLTCIALMYRQKAMAERSSSLLIQEGLYRKAIDLLKAPALETDDANGSVEKQTQNVERRDIVALARGGYAEALGVQENRKAEGERMKKWAEAAWRNRRLSLAEALDISESSSKVPVVDARICRAL*

Click here to download the sequence:
Link to NCBI Protein BLAST