Transcript Information: R_Transcript_49921.p1


Annotated TAIR IDAT1G09900.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3218133-3219929 | Forward length=598
E-Value4E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.823346528399
Replicate 28.9984144641277
Replicate 39.5482096046584
Condition 2: 8 Hour
Replicate 19.0084982584777
Replicate 29.8895485246731
Replicate 311.899783870508
Condition 3: 24 Hour
Replicate 112.399911535903
Replicate 210.790244075625
Replicate 311.77909743424


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49921.p1 GENE.R_Transcript_49921~~R_Transcript_49921.p1 ORF type:complete len:511 (+),score=76.17,PPR_2|PF13041.2|9e+03,PPR_2|PF13041.2|0.0052,PPR_2|PF13041.2|1.9e-14,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|1.7e+02,PPR_2|PF13041.2|0.16,PPR_1|PF12854.3|4.7e+03,PPR_1|PF12854.3|0.0073,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|2.8e-08,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|2.8e+03,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|4.9e+03,PPR|PF01535.16|0.0012,PPR|PF01535.16|8.1e-08,PPR|PF01535.16|1,PPR|PF01535.16|36,PPR|PF01535.16|0.49,PPR_3|PF13812.2|7.8e+03,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|16 R_Transcript_49921:291-1823(+)
ATGGGAGTTTTCAGTTTCTGCAAGAAGTCAAGGTTTTCCTTAAACCCGACTTTTCTATATTGCCCTCTTCTCTCTTGTCATTCTAGAACCCTAACCTCCTTATCCCCTGCCCCAACTCATTCTGCCCCAGATCCTACAGATTCTCCCATTGTCTCAACTGGGGACTTTTCTTTTTCTCAAAGCAGAAGTTCTACATCTTTAAAATATTATCCTTCGGCCACCTTCCCATATGGGTCTCATATGGCTGATAGTTTTAGAAGTTATATTTGTATGCCAACTGTTTGCTTGCGGAGTGACTATGGAAAATTTAGATCTTTTTCAAGTTCTGCTAACACAGTCAGAACTTTGGGCAGTGATGGAAAATTCAAACATACTGAGTTTCGTTTGAAATCTGCTGAAATTAGCAACATAATTGATATAATTAAAAAAGATGGAAGTGATATGGAATCCAGTTTAGATTTGATTGGTTCAAATTTTTCCAAGTGGTCTGTTATTGATATTTTGTTGGGTTTGAATGCTGGCAAGGTGCCTGCCTTGAGGTTCTTTGAATGGGTTAGAGATGTGCATCCATCACATTCTGGAAATGCTGATGTTTGTAGCTTGATAATTGACAATTGTGGGCTGTTGGGTGATTATACTACTATGCTGAATCTGCTGAAGGATTTCCGAAAGAAACAGATTTGTCTTAACGCCAAAGCTTTTGGTTTTTTGCCCCTATTGAGCACAGCAAAGGAGGAAGCTAAGAAATCTATACAAGGAGTTTTAGTGGTTCTAAAAGAAGTTGGTGGGTCATGTCGTAACTCTGGGATTTATTCGTTGATTGAGTTGCTTTGTTCTCTGAATTCATTTGAGTTAGCATCATATATTATTGAAATAACAGAGCGAAGAGCGTCTTATTACAATATTTTGGTAAAACATTTATGTATGAGTGGCCAGTATGAAGAAGCAAGGAATATGATTGAAGAGATGTGGAAAGTTTGCTCTGAACCTGAAGCTACAGCGTACAATTTCTTGATTAGTAATTTATGCAAGGAAGGCAGGCCTGACGAAGCATTCTCTGTTCTGGATGAGATGCTACAAAGAAGATGTTCTCCTAATGTGATTACTTTTGATATATTGATATATTTCGCTTGTAGATATGGCAGGTCAGCAGATGCTGTCAAGTTCTATAATCAAATGGTTTCTCTAAGCATTGAACCACGTCCTACCACGCATTGTGCTTTTGTGAGGGGTTATTTCAATTCCCGACGGTTTGAGGAAGCATATAAATATGTGGTTAAGAGAGCTGAAGAGGATAAACAATCAGCTCAGGCGATCTACAATGCATTGGCTGGCCTTCATCTAAAACGCGGGGATCTTCTTTTTGCTCACAACCTTCTTGTAGAAATGATTAGAAAGGAGATTAAACCTAAAAACTCACTTTATCTGAGAGTTTCACAACGTCTCCGCAAGACTGGCAAGGCACACCTTGCTAGAAACTTGGAGGCTCAGATTTCTAACTTTATGCAGAAATTCAGACAAGATTCTCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49921.p1 GENE.R_Transcript_49921~~R_Transcript_49921.p1 ORF type:complete len:511 (+),score=76.17,PPR_2|PF13041.2|9e+03,PPR_2|PF13041.2|0.0052,PPR_2|PF13041.2|1.9e-14,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|1.7e+02,PPR_2|PF13041.2|0.16,PPR_1|PF12854.3|4.7e+03,PPR_1|PF12854.3|0.0073,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|2.8e-08,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|2.8e+03,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|4.9e+03,PPR|PF01535.16|0.0012,PPR|PF01535.16|8.1e-08,PPR|PF01535.16|1,PPR|PF01535.16|36,PPR|PF01535.16|0.49,PPR_3|PF13812.2|7.8e+03,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|16 R_Transcript_49921:291-1823(+)
MGVFSFCKKSRFSLNPTFLYCPLLSCHSRTLTSLSPAPTHSAPDPTDSPIVSTGDFSFSQSRSSTSLKYYPSATFPYGSHMADSFRSYICMPTVCLRSDYGKFRSFSSSANTVRTLGSDGKFKHTEFRLKSAEISNIIDIIKKDGSDMESSLDLIGSNFSKWSVIDILLGLNAGKVPALRFFEWVRDVHPSHSGNADVCSLIIDNCGLLGDYTTMLNLLKDFRKKQICLNAKAFGFLPLLSTAKEEAKKSIQGVLVVLKEVGGSCRNSGIYSLIELLCSLNSFELASYIIEITERRASYYNILVKHLCMSGQYEEARNMIEEMWKVCSEPEATAYNFLISNLCKEGRPDEAFSVLDEMLQRRCSPNVITFDILIYFACRYGRSADAVKFYNQMVSLSIEPRPTTHCAFVRGYFNSRRFEEAYKYVVKRAEEDKQSAQAIYNALAGLHLKRGDLLFAHNLLVEMIRKEIKPKNSLYLRVSQRLRKTGKAHLARNLEAQISNFMQKFRQDSH*

Click here to download the sequence:
Link to NCBI Protein BLAST