Transcript Information: R_Transcript_49935.p1


Annotated TAIR IDAT5G56890.1
Annotated Gene NameProtein kinase superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23010801-23015559 | Reverse length=1113
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.273632484679
Replicate 28.346207753251
Replicate 310.86967503147
Condition 2: 8 Hour
Replicate 111.508079222091
Replicate 212.484614663312
Replicate 316.322059833055
Condition 3: 24 Hour
Replicate 115.963865954485
Replicate 210.165900757039
Replicate 320.102976784908


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49935.p1 GENE.R_Transcript_49935~~R_Transcript_49935.p1 ORF type:complete len:883 (+),score=179.04,Pkinase_Tyr|PF07714.13|4.5e-48,Pkinase|PF00069.21|2.4e-44 R_Transcript_49935:701-3349(+)
ATGGGGACAGAAATGGCATTTCCTGTGTTAAGATTTTGTGTAATTCTGTGCTCTTTTCTACTTCATGGATCTTCAGCAGAACATGTTGCAAATGATGTTCTCTCTCCTGCACTTACTCCCACCTTCAGGAGAAAAGTAGCACAGCCGAAAAAGACATTTGTTTCCTCTACGCCCATCAGTCAATCTCCTAGAAGAGCTCCATCGATGCGTGATATTAGAAGGCCTACAATTGGCTCACCTGCACCTTCTGAATCACATTTTCAGCATTCTGCAAGGATGCATACCAATTCAGTTGCATCTCCCATTGGAGATTCATATTATAACCGTCATCACCACCACTACCATCATCAACATCAGCATAAAAATCTTTATAGTCATCATCATGCAAAGAACCGATTTGTCAAATCAGGTGCAGGACCATCAGACTTGCTTCCTCCTCCACCACTTGGCCATCATGCTATGGGCCCCTCATATGTAGTCTCTCCGCGTCAGTCACCTGATTCTTCAACAACAAGCCAGAGTTCAACTAGACCTGCTCCATCACCAATGGTTTCACAAGTGCCTATTTATCCACCCGCAATCTCTCCTACGAGTTCTACTTTGACGATGACTCCTCCAGCTTCAACATTCTTGTTACCACCACCACCTCCTAATCAGGATTGCGCAGCAATAACATGCATGGAACCCTTGACTTATACGCCACCTGGGTTACCATGTGGCTGTGTCCAGCCAATTCAAGTTAGAATGCGCCTTAACATTGCTCTATATACATTCTTCCCTTTGGTTTCTGAGTTGGCTGAAGATATCTCTTCAAGCCTTTCGCTTAAACCTAGTCAAGTACGCATCATGGGAGCAAATGCAGCCAGCCAGCAGCTACAACAAACCATTGTCCTTGTCAACTTGGTTCCATTGGAAGCAAAATTCAATGATGCAGCTGCATTTTCAGCTTACCAGAAGTTTTGGCACAGGAAAATTCAAATAAATTCTTCCCTCTTTGGATCTTATGAAGTGTTGGATGTTCACTATCCAGGTCTTCCACCTTCTCCACCCTCCCTAGCCTCAAATCTTGCTACTATGGATAGACATCCTTATTCGGCTGACAATAAAGACAATGGTAGAAATTTACCAAAACCTCTGGGGGTTGATGTACCAAGAAAGCAGAAGAGTGGGCTTGATGGAAGCGTGCTAGCTGCAGTTATAGTATCCTCTGTCACAGGTTTTGTAATATGTATAGCTCTTGCTTCGATTGCAATTATAAGATGTCGATCCCCTGCTATTCAGTCAGAAGAAGCTCCCCCTACTTCAATCTCTTCATTTAAGAAGCCACCAGGAGCTGCTCGGTCTTTGGGGTCAGTGAGCAAATCCATTTCTGGATCAATGTCTTTTGATTCTGCCATACCAACTTTTACTGGATCTGCTAAAGTTTTTAGCCTTGAAGACATAGAAAGGGTTACTGATGGGTTTGATGTCTCGAGAGTTCTGGGAGAAGGTGGATTTGGACTTGTATACAGGGGCACTTTCGATGATGGAGAGCAAGTGGCTGTGAAAGTCTTGAAGAGGGACACAAGGCATGGTGGTCGCGAATTCTTGTCTGAAGTTGAGATGCTTAGCCGTTTGCACCATAGAAACCTCGTTAAATTAATTGGTATATGCACAGAAGACCATATTCGCTGCCTTGTTTATGAGCTGGTTCCAAATGGAAGTGTTGATTCCCATTTACATGGAGTTGACAAGGAAATTGCTCCTCTGGATTGGGCAACCCGCATGATAATTGCCCTTGGTGCTGCTAGAGGTTTGGCCTATCTACATGAAGATTCTAGCCCATGTGTCATACACCGTGACTTCAAGTCCAGCAACATTTTGTTGGAACATGATTTCACACCAAAAGTGTCAGACTTTGGATTAGCTAGAACTGCATTGAACGAGGGAAATCAACCCATTTCCACGCATGTTATCGGGACATTTGGTTATTTGGCTCCAGAATATGCCATGACTGGTCATCTTCTTGTGAAGAGTGATGTTTACAGCTACGGGGTAGTTTTACTGGAGCTCTTAACTGGAAGAAAACCAGTTGACTTCTCAAAACCACCAGGTCAAGAAAACCTGGTAGCATGGGCCCATCCACTTCTCACCAGCAATGAAGGATTGGAAACAATAATGGATCCCATGTTAAAGCCGACTGCTCCATTGGAGAGTTTCTCCAAGGTAGCAGCAATTGCATCTATGTGTGTGCAGCCTGAGGTATCCTTCCGTCCATTCATGGGAGAAGTTGTTCAGGCCCTGAAACTTGTCTGCAGTGAGTTCGATGATGCAAAAGAGGAAGGACCGACAAGCAGCTTCAACCATGCAGAGGCTTCTGTTGTCGATGAAGATAGCAAGAGCGGTCAAATTTTGGGTGAATTTAATGAACTTTCTGGAATTCGCTGTTCTGTGCTTGGCTATGAATCAGGTTCTGATGCTAAAATAGCATCGTCATCAACAGATTTGGTGCGAGCTTCAGAAGAATTCAAGGAGCGGGAATATCGATCTTTGAGAAGGCATTACAGCTCCGGGCCTCTGGGATCGGGAAGTAAAAGGCAATTCTGGCAGAGATTAGGACGGTTTTCAAGAGGGAGCATGCGAGAACGTCTTTGGCCTGGATCCCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49935.p1 GENE.R_Transcript_49935~~R_Transcript_49935.p1 ORF type:complete len:883 (+),score=179.04,Pkinase_Tyr|PF07714.13|4.5e-48,Pkinase|PF00069.21|2.4e-44 R_Transcript_49935:701-3349(+)
MGTEMAFPVLRFCVILCSFLLHGSSAEHVANDVLSPALTPTFRRKVAQPKKTFVSSTPISQSPRRAPSMRDIRRPTIGSPAPSESHFQHSARMHTNSVASPIGDSYYNRHHHHYHHQHQHKNLYSHHHAKNRFVKSGAGPSDLLPPPPLGHHAMGPSYVVSPRQSPDSSTTSQSSTRPAPSPMVSQVPIYPPAISPTSSTLTMTPPASTFLLPPPPPNQDCAAITCMEPLTYTPPGLPCGCVQPIQVRMRLNIALYTFFPLVSELAEDISSSLSLKPSQVRIMGANAASQQLQQTIVLVNLVPLEAKFNDAAAFSAYQKFWHRKIQINSSLFGSYEVLDVHYPGLPPSPPSLASNLATMDRHPYSADNKDNGRNLPKPLGVDVPRKQKSGLDGSVLAAVIVSSVTGFVICIALASIAIIRCRSPAIQSEEAPPTSISSFKKPPGAARSLGSVSKSISGSMSFDSAIPTFTGSAKVFSLEDIERVTDGFDVSRVLGEGGFGLVYRGTFDDGEQVAVKVLKRDTRHGGREFLSEVEMLSRLHHRNLVKLIGICTEDHIRCLVYELVPNGSVDSHLHGVDKEIAPLDWATRMIIALGAARGLAYLHEDSSPCVIHRDFKSSNILLEHDFTPKVSDFGLARTALNEGNQPISTHVIGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSKPPGQENLVAWAHPLLTSNEGLETIMDPMLKPTAPLESFSKVAAIASMCVQPEVSFRPFMGEVVQALKLVCSEFDDAKEEGPTSSFNHAEASVVDEDSKSGQILGEFNELSGIRCSVLGYESGSDAKIASSSTDLVRASEEFKEREYRSLRRHYSSGPLGSGSKRQFWQRLGRFSRGSMRERLWPGSH*

Click here to download the sequence:
Link to NCBI Protein BLAST