Transcript Information: R_Transcript_49979.p1


Annotated TAIR IDAT5G61390.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24678802-24680857 | Reverse length=487
E-Value2.6E-173
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1568324648494
Replicate 23.5847342174167
Replicate 35.2145418918071
Condition 2: 8 Hour
Replicate 14.7777297458039
Replicate 25.1357309919796
Replicate 37.0466618465323
Condition 3: 24 Hour
Replicate 16.9060070522362
Replicate 25.3345036747535
Replicate 36.0502598321505


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_49979.p1 GENE.R_Transcript_49979~~R_Transcript_49979.p1 ORF type:complete len:492 (+),score=69.07,RNase_T|PF00929.20|4.6e-27 R_Transcript_49979:383-1858(+)
ATGGCGGAAACATCTTCAGACAGATCAGAGATAGTCTTCTTCGATGTAGAAACGACAGTCCCACAGCGCCAAGGCCAAGGCTTCGCCCTCCTCGAATTCGGCGCTATTCTCGTTTGCCCTAGAAAGCTAGTCGAGCTCCAAAGCTACTCCACTCTCGTTCGCCCTCACGATCTCTCTCTCATTTCTTCCAAATCGGAGCGCTGTAATGGTATTACTCGTGACGCAGTCGCTTCCGCCCCTCCTTTCTCCGCCATTGCCGACAAAGTCTTCGATATCCTTCACGGGAGGATATGGGCGGGGCATAATATAATAAGGTTTGATTGTGCGAGGATCCGACAGGCGTTTGCTGAGATTAGACGGCCGTGTCCTGAGCCTAGAGGGATTATTGATTCTTTGGCTTTGTTGACTGAAAGATTTGGCCGCCGTGCTGGCAATATGAAGATGGCCACTCTTGCCACATACTTTGGGCTAGGTCAGCAGACCCATAGGAGCTTAGATGATGTGCGAATGAATCTTGAAGTTCTGAAGTATTGTGCGACAGTTCTCTTCCTGGAATCAAGCCTGCCCGACGTACTTGCAAGTAACAGTTTGGCTTCTCCAAGTACTGCCCGAGCAACTCGTAGTGGTGGGAGAGTTTTGCCAGTGCAGATGAGCTTCACTACCAGCTCAGATTCCCAATCTAAAAGCCATACAAATCAATCATTGGGGGAGCAGATTCTTAACTTTGTTGAGCCTACTAGACCTGAAACAGAAGCTTTTAACATGAGAAGACTTTCTGAGGAAATAATGGCTGATGCCATCCAAGAAGACAATCCCATGGAGGAACGGCCTGTAACTCAAACTCCGGAGGCATGTCATGCACCAACGGCATCTGAGGCTTGCTGCAGTTCTTCTGCATTCTTGACTCCTGATGATGTTTCTATTCCTTCTATCAGTGCGTCTCTGATTCCATTCTATCGTGGAAGTCAAAAGATTCAGATATTGCACAATGGTGTCTTTCTAAAGCTTCTCTGCCCTCATCTGAAAGTACGGTTTGGAATCAGTACGAAGTTTGTAGATCAGTCGGGTCGTCCACGGCTGAGCTTTGTAGTGGATGCTCCGCTGAGCTTATGTCAGGTCCTGGATGCTTGTGATAATCATGCACAGAGCATGTTCAATCAGTCGGGCAGCACATCTGATTGGAGGCCTGTAGTATCCAGAAAGAATGGCTATTGGAACTACCCTACTGTTCGGCTTCATATACCTACTGTTGTAACTGGGGATGTTGCGAGATATGGTACCGAGATATTCCAGAAAGAAGCTGCTTCCGATGCTGAACAAAAGCTCTTATTTAGTAAATTTGATGCTGCAGAACTTGAGACCTTGTTACCTTCTGGGATTCTTGTCGATGCATGCTTCTACTTGGATCCATATGATTATCAGCAGAATGCAGGCATCCGATTGGTGGCCGAGAAATTGGTTATTCATTTGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_49979.p1 GENE.R_Transcript_49979~~R_Transcript_49979.p1 ORF type:complete len:492 (+),score=69.07,RNase_T|PF00929.20|4.6e-27 R_Transcript_49979:383-1858(+)
MAETSSDRSEIVFFDVETTVPQRQGQGFALLEFGAILVCPRKLVELQSYSTLVRPHDLSLISSKSERCNGITRDAVASAPPFSAIADKVFDILHGRIWAGHNIIRFDCARIRQAFAEIRRPCPEPRGIIDSLALLTERFGRRAGNMKMATLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESSLPDVLASNSLASPSTARATRSGGRVLPVQMSFTTSSDSQSKSHTNQSLGEQILNFVEPTRPETEAFNMRRLSEEIMADAIQEDNPMEERPVTQTPEACHAPTASEACCSSSAFLTPDDVSIPSISASLIPFYRGSQKIQILHNGVFLKLLCPHLKVRFGISTKFVDQSGRPRLSFVVDAPLSLCQVLDACDNHAQSMFNQSGSTSDWRPVVSRKNGYWNYPTVRLHIPTVVTGDVARYGTEIFQKEAASDAEQKLLFSKFDAAELETLLPSGILVDACFYLDPYDYQQNAGIRLVAEKLVIHLK*

Click here to download the sequence:
Link to NCBI Protein BLAST