Transcript Information: R_Transcript_50018.p1


Annotated TAIR IDAT5G51170.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0406 (InterPro:IPR019146); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20793906-20795330 | Reverse length=285
E-Value1.7E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2523954651523
Replicate 24.9880713696178
Replicate 35.3153755747978
Condition 2: 8 Hour
Replicate 14.5995547414715
Replicate 24.4474682115065
Replicate 36.7191044837896
Condition 3: 24 Hour
Replicate 15.5809034144695
Replicate 25.9707606941342
Replicate 35.1998414449535


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50018.p1 GENE.R_Transcript_50018~~R_Transcript_50018.p1 ORF type:internal len:181 (+),score=38.88,HVSL|PF09749.5|2e-34 R_Transcript_50018:1-540(+)
CGTGTACCACAAGCTGCAAGGAAGGAAGCAGCTCAGTTCTTGAAGAGAGTCTCATTTAATGTTCCTGGTCTTCATGTTGTTGATGTTGATGTACCATTTGACAATCTCAGAAATGATGACCAGAAACTTGAACAGATTGCCTTGGGGAGGGAATTCCATATAAGTTTGGGAAGGACTGTTCCCATTAGGGTGCATCAAATTGATTCAATGGTCACTATGCTTCGCCAGAAGCTACAATGTCAGAAGCGGTTAGCTTGGTATTGGATAAATTTCAGCAAGTGGGAGGTTTTTTTAAATGATGATTGCACACGCACCTTTCTTTCAGCAGAAGTCATTACAGGAGGCTTGTCTGAGATAACGAAGCAGATTCAAGCTGTCAATGAAGTGTATAGGCTTCACAATCTTCCCGAGTTTTACAAGGATCCGCGTCCTCATATATCATTGGCATGGGCATTGGGCAATGTTAGTGCTTTGCTTCAAAGAGTGGTTGGAGAAGAGACGAAGAAACATCCGAATGTTGTGGGATCATTACAACAACGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50018.p1 GENE.R_Transcript_50018~~R_Transcript_50018.p1 ORF type:internal len:181 (+),score=38.88,HVSL|PF09749.5|2e-34 R_Transcript_50018:1-540(+)
RVPQAARKEAAQFLKRVSFNVPGLHVVDVDVPFDNLRNDDQKLEQIALGREFHISLGRTVPIRVHQIDSMVTMLRQKLQCQKRLAWYWINFSKWEVFLNDDCTRTFLSAEVITGGLSEITKQIQAVNEVYRLHNLPEFYKDPRPHISLAWALGNVSALLQRVVGEETKKHPNVVGSLQQR

Click here to download the sequence:
Link to NCBI Protein BLAST