Transcript Information: R_Transcript_50061.p1


Annotated TAIR IDAT3G07180.1
Annotated Gene NameGPI transamidase component PIG-S-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2282455-2285475 | Reverse length=599
E-Value7.9E-255
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3240721072226
Replicate 24.2782430315341
Replicate 35.7446363877498
Condition 2: 8 Hour
Replicate 15.5649693061921
Replicate 25.6077446623663
Replicate 37.3118556887766
Condition 3: 24 Hour
Replicate 15.7934278427278
Replicate 24.3903101553344
Replicate 36.9299629259456


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50061.p1 GENE.R_Transcript_50061~~R_Transcript_50061.p1 ORF type:5prime_partial len:638 (+),score=112.87,PIG-S|PF10510.5|4.5e-126 R_Transcript_50061:1-1914(+)
AAAAGAATACACAATCGGAAATCAAGAAAAACGATGCCGGAATCATCGGAGAGAGAGAAACTGATTCCCGGAACTCCGATGGATGAATCCGACGAAATTAAACAAAATGTCTCCGGAGATCCAACTCCGGTGCCGGAATCTGAGCCATTATTCGATTCGTCGAAGTTCCGAAAGACGAAGCCTGGAGTGAAGCGCCTCACTCTCACCCTTTCTGTCCTCTTCTCTTTCCTCTTAGGACTTCCATTTTTGCTCAAGTCAGTGGAAATTTATAGATCGCCACTTCCATTTAAAGAAATGGATTCACTCTCAAGTGTACTTGTATCGGAGCCGCTGCTGTTTCCGTGCCTGTTCCAAGCTGTGTTCCTAGGGTTTGACAATATTAAGGATGCTGACAGACTTAGGTCATCCATTGCTGATCAGATGAGGGGAAAAATGAGTCATGAAAGAGTTTGTGGAAGCTGTGGCACCAATTTTACCGTTTCAGTGTCTATGCAGTCGGAGAATGATTGTGTGCAAAGCCAGAATGGCGGACATGTCTGTTCATGGGAATGTGGGTTGCTGAAAGAGACTGGTTTTGATGCGAAGTTGAAAGATGACGATCACTTTGATGAGTTGTTGGACAGTATTCTGTTGAATAGTCAGAAATGCTCGGGTTCTGATGCTGGAAAGCAAAAGGTTTACACAATTGTCGTTGTGAATAGAAATGATGAAGTTCGGATAGTGGTGGGGAAGCATAGGCATGCGTGGATCATTGGCAAGGTTTCGGAGGAGGATGCTGTCGTGTGGATAGCTGATATGTTTGTTAATGTATTTATTAATGGTGGGAAGGAAGAAGGTTCGATTCATGGGGAGTTTATGCCTGTTGGTTCTGATGGCCGGGTGGTGCTATCGTTTAGTCTGTTAAATGCAGATCCTCGTGACTGGATTTATGATTGGGACTTTCAGAGTGTACACGAGAGTCTGCTTGCTCCCATTGTGGAGGCTTTGGCACCTATAGCTAACATAAGCATAGAAAGTCAGATTTTGTACCATACTCCAAAGTCATTTGTTTCTCAATGGGATGACCAGAGAAGCAGCTTTATCTTTAACACCAAGGATCTTCCATTCTTTGTAAATTCAAATGAATGGCATTTGGATACTTCCACTGCAGCAGGAGGGCGTTCCAAAATCTTGCACATTGTCGTATATATACCATCTGCAAAGGAGTGTCCTCTTGTACTGCAACTTCCGGATGGAGAGATCTCCATGCCAAATGGCTTCATATCTCCTATGTGGGGAGGTGTTATTGTCTGGAACCCACGTGGCTGTTCAACTCATTCTTTGAGTAAGCATCATTTGAGGCATACAATTCCCTTCCAGGATCTCCAGAACATCATTGAAATTTTCATGGGGCAGTTGCGACAGCTTTTTGGACTCAAGTCTCAGAACTTTTATGATGGGCCCATAGGCAGGGTACATCTTCTAGCTAATGAAAGAGGTTTCACAGAATGGGAATTGGACCTGTTGTCACGGCAGCATACATGCTTCAATCTCCAATCTTGTGCAAACACCCTTGGATCTCTTTCCAGATTGGTTCAATCACTTCCACGGATGATCATAATGGATGAGATAGGAAAGCAGGTAGAATTGTCTCTTCATGCAGCACAGAAGGCCCAAAGAAACGCTTCTCTTGGTGTCTATGATGATTCTGCTGTGTCTTCGCAGCAAGCAAGATCTCTAGCTGAAGATGCCTTTTTTCACCCATCTGTTATGTCTGTGAGCTACTACTCGTTCGAGCATTGTTTTGCAGTCTACTCGCCATTCTTCCTACCAGTTGCACTGCATGTTCTTCTTGCTGCTGTCAAAGAATGGAAAAGATACAGGCAGGAAATGTCGAAGTATTTAGCATGGAAAGCAAAAGAGGTTGTATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50061.p1 GENE.R_Transcript_50061~~R_Transcript_50061.p1 ORF type:5prime_partial len:638 (+),score=112.87,PIG-S|PF10510.5|4.5e-126 R_Transcript_50061:1-1914(+)
KRIHNRKSRKTMPESSEREKLIPGTPMDESDEIKQNVSGDPTPVPESEPLFDSSKFRKTKPGVKRLTLTLSVLFSFLLGLPFLLKSVEIYRSPLPFKEMDSLSSVLVSEPLLFPCLFQAVFLGFDNIKDADRLRSSIADQMRGKMSHERVCGSCGTNFTVSVSMQSENDCVQSQNGGHVCSWECGLLKETGFDAKLKDDDHFDELLDSILLNSQKCSGSDAGKQKVYTIVVVNRNDEVRIVVGKHRHAWIIGKVSEEDAVVWIADMFVNVFINGGKEEGSIHGEFMPVGSDGRVVLSFSLLNADPRDWIYDWDFQSVHESLLAPIVEALAPIANISIESQILYHTPKSFVSQWDDQRSSFIFNTKDLPFFVNSNEWHLDTSTAAGGRSKILHIVVYIPSAKECPLVLQLPDGEISMPNGFISPMWGGVIVWNPRGCSTHSLSKHHLRHTIPFQDLQNIIEIFMGQLRQLFGLKSQNFYDGPIGRVHLLANERGFTEWELDLLSRQHTCFNLQSCANTLGSLSRLVQSLPRMIIMDEIGKQVELSLHAAQKAQRNASLGVYDDSAVSSQQARSLAEDAFFHPSVMSVSYYSFEHCFAVYSPFFLPVALHVLLAAVKEWKRYRQEMSKYLAWKAKEVVS*

Click here to download the sequence:
Link to NCBI Protein BLAST