Transcript Information: R_Transcript_50079.p1


Annotated TAIR IDAT4G19970.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT5G44820.1); Has 801 Blast hits to 466 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 750; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:10818242-10825343 | Forward length=715
E-Value8E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3011843818875
Replicate 23.849321742988
Replicate 35.5357949190702
Condition 2: 8 Hour
Replicate 15.6113440504104
Replicate 25.7765611423063
Replicate 35.0673246315247
Condition 3: 24 Hour
Replicate 16.8873421683112
Replicate 24.6867425142477
Replicate 35.5631249412531


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50079.p1 GENE.R_Transcript_50079~~R_Transcript_50079.p1 ORF type:complete len:240 (+),score=34.49,Nucleotid_trans|PF03407.12|2e-31 R_Transcript_50079:4376-5095(+)
ATGGAGGGAGAAGCCAAAAGTGTTAAGCAGCCGCCATGGGAGCTTGCAAGGATGCTCAAGGTTGTGGGTTTATTTTTGGCAATGGCAGTTCCATGCATTGTTCTTTACTTTTCTTCATCAAACAACAACTTTGGTCAGTTTTTGCCTACCTTGTCTTTCTACAATATCATCAATGGAGCTTCCAATTCATCCTCAAGAGATCACCCGGTACATGAGGACTACAACGAGCTGAGAAAGGTGTTAAAGGCAGCTTCAACGAAGGAGAAAACAGTGATATTGACCACCTTGAATGAAGCATGGGCAAAGCCAAATTCTATATTTGATATCTTCCTTGAGAGCTTCAAAATTGGGAATAATACATCCAGGCTTTTAAATCATTTATTGGTCATAGCAGTGGATGAAAAAGCTTATTCTCGTTGTCAAGCTTTGGTCTCCCATTGTTATTTTTTCAAGAGTAATCAGTCCAATGAAATGGCTCATGAGGCCAGGTTTATGACCCCTATCTATATGGACATGATGTGGGCTAGACTTTCCTTCTTGCATACTATTTTGAGCTTGGGATACAACTTTGTCTTCACGGATACAGATGTTATGTGGTTGCGAGATCCGTTTCCGTATTTTTCACCTGGCATAGACTTTCAGACTTCATGTGATCATTTCAATGGCAGACCATCCGTTTCCGTATTTTTCACCTGGCATAGACTTTCAGACTTCATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50079.p1 GENE.R_Transcript_50079~~R_Transcript_50079.p1 ORF type:complete len:240 (+),score=34.49,Nucleotid_trans|PF03407.12|2e-31 R_Transcript_50079:4376-5095(+)
MEGEAKSVKQPPWELARMLKVVGLFLAMAVPCIVLYFSSSNNNFGQFLPTLSFYNIINGASNSSSRDHPVHEDYNELRKVLKAASTKEKTVILTTLNEAWAKPNSIFDIFLESFKIGNNTSRLLNHLLVIAVDEKAYSRCQALVSHCYFFKSNQSNEMAHEARFMTPIYMDMMWARLSFLHTILSLGYNFVFTDTDVMWLRDPFPYFSPGIDFQTSCDHFNGRPSVSVFFTWHRLSDFM*

Click here to download the sequence:
Link to NCBI Protein BLAST