Transcript Information: R_Transcript_50131.p1


Annotated TAIR IDAT2G47330.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:19429083-19431617 | Reverse length=760
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.520543554556
Replicate 223.047352899124
Replicate 330.296957566119
Condition 2: 8 Hour
Replicate 124.454392113123
Replicate 228.367853955334
Replicate 331.613666311856
Condition 3: 24 Hour
Replicate 131.043204631806
Replicate 228.405359136707
Replicate 329.314894966256


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50131.p1 GENE.R_Transcript_50131~~R_Transcript_50131.p1 ORF type:complete len:778 (+),score=172.02,DEAD|PF00270.25|4.2e-49,Helicase_C|PF00271.27|9.9e+03,Helicase_C|PF00271.27|1.2e+02,Helicase_C|PF00271.27|3.1e-26 R_Transcript_50131:152-2485(+)
ATGTCGAAACGCAAATTCGGATTCGAAGGTTTCGGAATAAACCGGCAACAAACCTACAACTTCGAGCGATCTCAACAACCTCGTCAAAACCTCTACGTCCCACCACGATCTTCTCGTTCTCACGACCACTACGAAGACACCGATCTCGACAACATCGACTACGCCGAAACCGACACGACCACAACCACCGACACTTCCGCCGACAACAACAACAACGTTGTCGATGACGAAGTGGACCCACTGGACGCGTTCATGGAAGGAATACACGAGGAAATGAAGGCAGCACCAGCGCCAAAACCGAAGGAGAAGCTAGACAAGTATAGAGATGACGATGATGACGAGGACGATCCAATTGAGAGCTTCTTGAGAGCCAAGAAGGACGTAGGGCTGACGTTAGCATCGGATGCTCTTCACGCTGGCTATGATTCCGACGAGGAGGTTTATGCTGCTGCTAAAGCTGTTGATGCTGGTTTGATTGAGTATGATTCCGACGATAATCCGGTTGTGCTTGATAAGAAGAAGATTGAGCCAATTCCTGCTTTGGATCATAGTGAGATTGATTATGAGCCTTTTAACAAGGATTTTTATGAGGAGAAGCCTTCCATTTCAGGCATGAGTGAACAGGATGTCACGGAGTACCGGAAAAGCTTGAAAATCCGCATCTCTGGTTTTGATGTTCCAAGACCCGTTAAGACTTTTGATGATTGTGGCTTTCCTCCAGAACTAATGAGCGCAATTAGGAAGCAAGGCTATGAGAAGCCTACCAACATACAGTGCCAGGCATTGCCTATAGTGCTGTCTGGGTTGGATATTATTGGTATTGCAAAGACTGGCTCTGGAAAAACTGCTGCGTTTGTGCTTCCTATGATTGTGCACATAATGGACCAGCCAGAGCTTGACAAAGGAGAGGGTCCAATTGGAGTTATATGTGCTCCTACTAGGGAATTAGCTCATCAAATATATCTGGAAGCTAAGAAATTTGCAAAACCCTATGGTGTTCGTGTATCTGCAGTCTATGGTGGAATGTCTAAACTTGATCAGTTTAAGGAACTCAAGGCGGGGTCTGAAATTGTAGTTGCTACCCCTGGGAGATTAATTGATTTGTTGAAAATGAAAGCATTAACAATGAGAAGAGCAACTTACCTGGTGCTTGATGAAGCAGATCGTATGTTTGACCTTGGTTTTGAGCCACAGATAAGGTCAATTGTTGGTCAGATCAGGCCAGACCGTCAGACTTTACTCTTTTCAGCAACTATGCCTCGGAAGGTTGAAAAATTGGCTAGAGAGATTCTTTCTGATCCTGTGCGTGTTACGGTGGGGGAGGTAGGCATGGCAAATGAGGATATCACTCAGGGTGTTCAAGTACTTCCCTCCGATGCAGAGAAGCTACCTTGGCTCCTAGAAAAGCTACCGGGAATGATTGATGAGGGTGATGTTTTGGTGTTTGCTTCTAAGAAGGCCTCAGTGGATGAAATTGAGTCTCAGCTTGCACAGAGAGGGTTCAAAGTTGCTGCTCTTCATGGTGACAAGGACCAGGCTTCTCGGATGGAGATATTGCAGAAGTTTAAGGCTGGGACCTTTCATGTTCTTATTGCAACTGATGTTGCTGCGCGAGGTCTTGATATCAAGTCAATCAAGTCAGTTGTCAACTTTGATATTGCAAAAGATATGGATATGCATGTACATCGTATTGGTAGAACAGGTCGTGCTGGTGATAAGGATGGAACAGCATACACGCTTATCACACAAAAGGAGGCCCGTTTTGCTGGGGAATTGGTGAATAGTCTGATTGCTGCTGGTCAGAATGTGTCCATGGAGTTGATGGATCTAGCCATGAAGGATGGAAGATTCAGGTCTAAACGTGATGCAAGGAAAGGAGGTGGTAAGAAGGGTAAAGGTAGAGGAGGAGTAGGTGGTAGAGGAGGCGCTGGTCGTGGTGTACGTGGTGTGGATTTCGGTTTGGGTATCGGATATAATCCAGAATCAAACAACACATCCTCTCAGACAGCTGGTCGGAGTGCTGCAGTGAATTCTCTTCGGACAGGTATGATGGCACAATTCAGGAGCAGCTTTGTACCTGCTTCAGCCAGCAGTCAAAATCAGGTGGCTAGCAATTCCAACACATCTGCCAATATGAGACCATCATTATCCGGCTTTGTTGCGGGTGGTGCCATTGGGGGAGATGCGAATAGACCTCAACCCACCCCTACGACAACAAATTATCCTGCAGTCTCAGAAGGGAGTGCAGCTGGTCAACAAAATGCCAGTCAGAAGAGCAGTGAAAGCTCGAGAGATAGAAGAGAAAGGCGGAGGCCGTCAGGGTGGGACAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50131.p1 GENE.R_Transcript_50131~~R_Transcript_50131.p1 ORF type:complete len:778 (+),score=172.02,DEAD|PF00270.25|4.2e-49,Helicase_C|PF00271.27|9.9e+03,Helicase_C|PF00271.27|1.2e+02,Helicase_C|PF00271.27|3.1e-26 R_Transcript_50131:152-2485(+)
MSKRKFGFEGFGINRQQTYNFERSQQPRQNLYVPPRSSRSHDHYEDTDLDNIDYAETDTTTTTDTSADNNNNVVDDEVDPLDAFMEGIHEEMKAAPAPKPKEKLDKYRDDDDDEDDPIESFLRAKKDVGLTLASDALHAGYDSDEEVYAAAKAVDAGLIEYDSDDNPVVLDKKKIEPIPALDHSEIDYEPFNKDFYEEKPSISGMSEQDVTEYRKSLKIRISGFDVPRPVKTFDDCGFPPELMSAIRKQGYEKPTNIQCQALPIVLSGLDIIGIAKTGSGKTAAFVLPMIVHIMDQPELDKGEGPIGVICAPTRELAHQIYLEAKKFAKPYGVRVSAVYGGMSKLDQFKELKAGSEIVVATPGRLIDLLKMKALTMRRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQGVQVLPSDAEKLPWLLEKLPGMIDEGDVLVFASKKASVDEIESQLAQRGFKVAALHGDKDQASRMEILQKFKAGTFHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGTAYTLITQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGVGGRGGAGRGVRGVDFGLGIGYNPESNNTSSQTAGRSAAVNSLRTGMMAQFRSSFVPASASSQNQVASNSNTSANMRPSLSGFVAGGAIGGDANRPQPTPTTTNYPAVSEGSAAGQQNASQKSSESSRDRRERRRPSGWDR*

Click here to download the sequence:
Link to NCBI Protein BLAST