Transcript Information: R_Transcript_50159.p1


Annotated TAIR IDAT4G13620.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7932138-7933304 | Forward length=388
E-Value3.5E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.797713498192
Replicate 215.161337658238
Replicate 319.358541339801
Condition 2: 8 Hour
Replicate 15.5218693161214
Replicate 25.4501465991045
Replicate 36.5329259180436
Condition 3: 24 Hour
Replicate 19.4132239202431
Replicate 211.153228869495
Replicate 310.17105183628


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50159.p1 GENE.R_Transcript_50159~~R_Transcript_50159.p1 ORF type:complete len:439 (-),score=86.51,AP2|PF00847.16|3.8e-11,AP2|PF00847.16|2.6e+03 R_Transcript_50159:414-1730(-)
ATGGAGGATCAGAGTTCTGAGTTGGAAACCCTGATGCAGAGAAAGATGCTGCCTGATCTCTACCCAACAACGACACCTCTTGGCTCCGGATTTTATGGTAAAATACACGACGATGTGTCCCCCGATCTTGATATCAAGATAAAATCTCCGTTTTGGTCGACAATTCTTGAGCCTAGTTCATGTTCTAACTCGGAGTTATTGTCCAAGAACTACTCCTTGATCATGTCGTCAGAATCTGATTTGGGTTCGCCCTTTGACCTTTCGACACTTCCTCCTTCCAAGCCCTCCAGTACAACTACTCTTCTAAATTTCTTCAAGTCTTCTTCAGTAGTTGCAGATAACCAGCATACTCCTGCTGTCAGCTCATCACCTGCTTCCATAACCTTGCTGTCAAAACAGACTGATGTTTCAGACCCATTGAGCGTTGATAAGGTTGGTAAATTGCTCGGAAGTCAGGACCAGATAATAGGACATGATCAGTGGCTGAGAATGAACGAGAACTTTTCTAGCTACACATCAAAAAGTCTCGCTGGTTTCGGGCTTAGTCCCACCAAGACGCAACCTATGAAGTATAGTGGTCGAAAGCTGCAGGCCTTGCTCCCCTATAACAAGAGTTCTTCACTACCAACAACAACAACATCATCATCTTCTTCTTCATCATCATCAACACCAAAGTCAGGGGGGAAGTTGTACAGAGGAGTAAGACAAAGGCACTGGGGAAAATGGGTGGCAGAGATCAGATTACCAAGAAACAGGACAAGGGTTTGGCTCGGAACTTTTGATACAGCTGAGGAAGCTGCTTTTGCATATGATACAGCTGCTTATATACTGAGAGGTGATTATGCTCATCTTAATTTCCCACATCAGAAGCACTTGCTTAAGTCTAGTTCCATCAATGGAGCTACTGCAGCTCTTCTCGAAGCCAAACTGCAAGCAATTTCAGCACAGCAAGGATTAAATATGAGCTCTCGCAAGAAAACCAACGACTTTGATTCTTCTTCTTCTTCTGTATCATCGTCATCAATATCTATGAACAATAGCTTGTCGGCTCTCCATCATGACAGTTCAAGTAGCAGCAGATCATCAACAGCATCAGGAATAATATTAGGCCAAAATTGTGTCAGAAAAGAATGGCAGTTTGACTTGGATTCTAAAGCCAATATTGGATCCGAGATGATGATGGAAAATATCAGTAATAGAAAGCTGATGAATCATGAAGTCTCCTTGGAGCACAACATTGATGCGGTCCAGCTAAGTAGAATGCCTTCCTTAGACATGGATATGATCTGGGATGCTCTTCTGGTACCTGATTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50159.p1 GENE.R_Transcript_50159~~R_Transcript_50159.p1 ORF type:complete len:439 (-),score=86.51,AP2|PF00847.16|3.8e-11,AP2|PF00847.16|2.6e+03 R_Transcript_50159:414-1730(-)
MEDQSSELETLMQRKMLPDLYPTTTPLGSGFYGKIHDDVSPDLDIKIKSPFWSTILEPSSCSNSELLSKNYSLIMSSESDLGSPFDLSTLPPSKPSSTTTLLNFFKSSSVVADNQHTPAVSSSPASITLLSKQTDVSDPLSVDKVGKLLGSQDQIIGHDQWLRMNENFSSYTSKSLAGFGLSPTKTQPMKYSGRKLQALLPYNKSSSLPTTTTSSSSSSSSSTPKSGGKLYRGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAEEAAFAYDTAAYILRGDYAHLNFPHQKHLLKSSSINGATAALLEAKLQAISAQQGLNMSSRKKTNDFDSSSSSVSSSSISMNNSLSALHHDSSSSSRSSTASGIILGQNCVRKEWQFDLDSKANIGSEMMMENISNRKLMNHEVSLEHNIDAVQLSRMPSLDMDMIWDALLVPDS*

Click here to download the sequence:
Link to NCBI Protein BLAST