Transcript Information: R_Transcript_50180.p1


Annotated TAIR IDAT1G72240.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22470.1); Has 65 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:27190211-27190573 | Forward length=120
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5628623657416
Replicate 29.2006260251194
Replicate 35.0188919452244
Condition 2: 8 Hour
Replicate 17.7034181856502
Replicate 29.9242116036722
Replicate 313.766670976136
Condition 3: 24 Hour
Replicate 113.284573845245
Replicate 212.51450083117
Replicate 311.804604774956


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50180.p1 GENE.R_Transcript_50180~~R_Transcript_50180.p1 ORF type:complete len:178 (+),score=33.51 R_Transcript_50180:80-613(+)
ATGAGAATGGGCAGATCATCATCAAAACCAAGAAACCAAAACTGTGGAGGGCAGTGCAAGAAGCACCCAAAGCACAAACAATCTCCAGGAGTCTGCTCTTTATGTCTTACAGAGAAGCTCTCAAGAGTGTCAACAAGCAGTTCTCGCTATGCCAGAATGAAAGGCAAAGCAAGAGCTTATTATTGTTCTTCTTCATCTCTATCTTCTAGTGAAGATTCTTCTTATGTTTCTACTCCTGGCTCCCCTGTTCTTCACCATCGCAGGATTGTGTCTGATGTTCGACCTCATGATCCGGTCTCATTAACTCTATCAAGACCGCTTAATAATGATGGTTTTGGGAAGAGCAGATCAATGGCTAATCGTGGCTTTGGTGGTAGTAACAAGAAGAATGCAATTAGTGGGTTTTGGTCAAAGTTGCTTGGTCCAAGAAGAAACAAAAACAACAACAACAAGAGTTCTCATCTTAGTAATAAGATGCTCTCTCAATCGCAGCCCCTTGGAGCTAGTACTAGCACTAGCATGCTCGTTTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50180.p1 GENE.R_Transcript_50180~~R_Transcript_50180.p1 ORF type:complete len:178 (+),score=33.51 R_Transcript_50180:80-613(+)
MRMGRSSSKPRNQNCGGQCKKHPKHKQSPGVCSLCLTEKLSRVSTSSSRYARMKGKARAYYCSSSSLSSSEDSSYVSTPGSPVLHHRRIVSDVRPHDPVSLTLSRPLNNDGFGKSRSMANRGFGGSNKKNAISGFWSKLLGPRRNKNNNNKSSHLSNKMLSQSQPLGASTSTSMLVY*

Click here to download the sequence:
Link to NCBI Protein BLAST