Transcript Information: R_Transcript_50223.p2


Annotated TAIR IDAT4G16144.1
Annotated Gene Nameassociated molecule with the SH3 domain of STAM 3
Annotated Gene Symbol(s)AMSH3
Annotation TypeOrtholog
Chromosome Positionchr4:9138053-9141422 | Reverse length=507
E-Value1.4E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.91264804773594
Replicate 21.3122687760186
Replicate 31.1453368798076
Condition 2: 8 Hour
Replicate 11.5303665592028
Replicate 21.1180440920593
Replicate 31.5882659292839
Condition 3: 24 Hour
Replicate 10
Replicate 21.1027629445289
Replicate 32.462366777276


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50223.p2 GENE.R_Transcript_50223~~R_Transcript_50223.p2 ORF type:5prime_partial len:80 (+),score=6.33,USP8_dimer|PF08969.7|2.2e-09 R_Transcript_50223:1-240(+)
TCTAGAAAGATCGATGTCGACAATCGCCTTTCTTTGGGCTATTATTATCGAATCGCTGACACCCTTCTTAAACAGGCCAATGTATATCGAGAGGAGAACAATATAGTGGATGTGTATGTTATGCTTGTCAGATATTCAAGTTTGGTGTCTGAAACAATACCATTCCATCGGGATTACCAGACTCTGCAAACCGGAGAAAAGACTTATTACAAAAAAGAAATTGCTTGCAGTGTTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50223.p2 GENE.R_Transcript_50223~~R_Transcript_50223.p2 ORF type:5prime_partial len:80 (+),score=6.33,USP8_dimer|PF08969.7|2.2e-09 R_Transcript_50223:1-240(+)
SRKIDVDNRLSLGYYYRIADTLLKQANVYREENNIVDVYVMLVRYSSLVSETIPFHRDYQTLQTGEKTYYKKEIACSVG*

Click here to download the sequence:
Link to NCBI Protein BLAST