Transcript Information: R_Transcript_50226.p1


Annotated TAIR IDAT4G16144.1
Annotated Gene Nameassociated molecule with the SH3 domain of STAM 3
Annotated Gene Symbol(s)AMSH3
Annotation TypeOrtholog
Chromosome Positionchr4:9138053-9141422 | Reverse length=507
E-Value1.3E-173
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.633661253647
Replicate 211.246175652956
Replicate 313.057403248912
Condition 2: 8 Hour
Replicate 111.731556915756
Replicate 217.635978061476
Replicate 315.252704747352
Condition 3: 24 Hour
Replicate 113.650588081338
Replicate 213.113937718722
Replicate 315.380549239441


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50226.p1 GENE.R_Transcript_50226~~R_Transcript_50226.p1 ORF type:5prime_partial len:407 (+),score=80.87,JAB|PF01398.17|4.1e-19,Prok-JAB|PF14464.2|5.8e-06 R_Transcript_50226:2-1222(+)
GTGTTGGATGAGCTGGAATCTTTGAAGCCTGAGTTCTTGCGTCGAGTGGATCAGCTGAACAAAGCTTATAGAGAAGCACAGCAGAATCAACTTGATGTCCGAGAGACATCATCAAATGGCTCTGAAACATCTGTCGCCTGGCCTTCTGCTTATGCTCCTAGTTATGAAACTAAGCAGCTGCAACCAGTAAGCAAGAAATTTCAGTCCTCGTGGAGCCAGAGTAATGACTATCAAACTGTGCCTTTGGAGCAAAAGTTCTCCAAGCTGTCCTTTTCTGTACCACTTCCAAAGCAAGAAACGTTGTCAAGACACTCTTTTCTAGGCCCAAATGGACTACGGGGTCAATGGCAGAGACCAAGTGCCGGACTTAAGGTGAGCTATCCAAGTCACACCGAGTTGACATTAACAGAAGATCTGAGCCTTATTCAAGGAAGACAAGATGAAGTTCAGGCTCCAAAAGATGAAAATATAGGACAAGATATGGAAGCTGTCCTGTCTTTAGCTGACGGTAATTGGTCAAGTCCTGAGAATGATGCACCCCTGGACATTATCAGGCAGCCAATGCCACCTCCTGTTCTTGCTCAAGTGCACCCAGAAGTTCGCTCTATTTCCCCTTCCAGAGTTGCTGATCCACGACCTGGACCAGCCATGTGTCCAGAGGATGGGGTGCGGAATGGCAATACATATCAACATTTGCATATTCCTGTGAGAATGATGGAAGATTTCTTGAGACTGGCTCAACAAAATACAGCAAAAAATCTGGAGACTTGTGGAGTTCTTGCAGGCTCATTGAAAAACCGGGTGTTTCACATCACTAACCTAATTGTTCCAAAGCAGGAGTCAACTTCTGATTCTTGCCAAACATTAAATGAGGAAGAAATATTTGAGGTTCAGGACAAATTGTCATTATTTCCTCTTGGATGGATCCATACGCACCCTACACAGACATGTTTCATGTCATCAGTTGACCTGCACACTCATTACTCGTATCAGATCATGTTACCAGAAGCAGTTGCAATTGTCATGGCTCCGACAGATTCATCCAGTCCACATGGGATTTTTCACTTATCCGACCCTGGAGGCATTTCTGTGATCCGAAACTGCCAACAGCGTGGGTTTCACCCCCATGAAGAGCCCTCAGATGGTAGCCCGCTATATGAGCACTGTTCACATGTTTATATGAACCCAAAATTGAGGTTTGATGTGGTGGATCTTCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50226.p1 GENE.R_Transcript_50226~~R_Transcript_50226.p1 ORF type:5prime_partial len:407 (+),score=80.87,JAB|PF01398.17|4.1e-19,Prok-JAB|PF14464.2|5.8e-06 R_Transcript_50226:2-1222(+)
VLDELESLKPEFLRRVDQLNKAYREAQQNQLDVRETSSNGSETSVAWPSAYAPSYETKQLQPVSKKFQSSWSQSNDYQTVPLEQKFSKLSFSVPLPKQETLSRHSFLGPNGLRGQWQRPSAGLKVSYPSHTELTLTEDLSLIQGRQDEVQAPKDENIGQDMEAVLSLADGNWSSPENDAPLDIIRQPMPPPVLAQVHPEVRSISPSRVADPRPGPAMCPEDGVRNGNTYQHLHIPVRMMEDFLRLAQQNTAKNLETCGVLAGSLKNRVFHITNLIVPKQESTSDSCQTLNEEEIFEVQDKLSLFPLGWIHTHPTQTCFMSSVDLHTHYSYQIMLPEAVAIVMAPTDSSSPHGIFHLSDPGGISVIRNCQQRGFHPHEEPSDGSPLYEHCSHVYMNPKLRFDVVDLR*

Click here to download the sequence:
Link to NCBI Protein BLAST