Transcript Information: R_Transcript_50243.p1


Annotated TAIR IDAT4G22360.1
Annotated Gene NameSWIB complex BAF60b domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11807811-11809660 | Forward length=385
E-Value2E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.496015757765
Replicate 233.67621778262
Replicate 336.740390863266
Condition 2: 8 Hour
Replicate 140.350789668565
Replicate 252.375855266151
Replicate 347.797761951484
Condition 3: 24 Hour
Replicate 144.568457063074
Replicate 236.992439117203
Replicate 342.169954262286


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50243.p1 GENE.R_Transcript_50243~~R_Transcript_50243.p1 ORF type:complete len:409 (+),score=107.65,SWIB|PF02201.14|1.1e-27,SWIB|PF02201.14|6.7e-14,DEK_C|PF08766.7|4.7e-06,DEK_C|PF08766.7|3e+03 R_Transcript_50243:2-1228(+)
ATGGCGTCGGTAAGTGACCAAGAAATAGCAGAAGGGATAACAGGGTTATTCAGAGAAACAAACCCTAATTCCTTCACTTCACTCAATGAAGTTATCCTTCGTCTTCAATCCAAATTAGGGGTTGTTGATCTTTCTCACAAAGTCGATTTCATTCGTGCTCAGATTGCGCTTTTCTTCAATTCCCCTCCACCCCCACCAGCCCCTGTTGTTCTTCCCCAAAACCCCCCAAACCCTAACCCTAATCTCAACATTCCCACCACCAATACTCATCATCATCATCATGTTGTTCACCCTCAGCATCACCAGCACCATGTTACTTATCATCAGCATCATCCTCAGCATCAGCAGCATCATTCTCACTTTGGGCCTGGGTTTGGTGGTGGTGGGCCGAGAGGGCCCACTGAGATTAGCTTTGCTCAGCCTGGTGGTAGTGTGCTTGAGCCTCATTCTTCGCCTGTTACCGCTGCCAAGGAGAGTACTCAAGCTCGCCCCAAAAGAAGAGGGGGTCCAGGTGGGCTGAATAAACTTTGTGGCGTTTCACCCCTGCTTCAGACAATTGTTGGCCAACCAGCAATGCCTAGGACAGAGATTGTGAAGCAGCTCTGGGCATACATAAGGAAGAATAATCTCCAAGATCCAAGTAACAAAAGAAAGATAATATGCAATGATGAGCTGCGATTGGTATTTGAGACTGACAGTACAGACATGTTTCAGATGAACAAGCTGCTGGCAAAGCATATCGTTCCTCTTGATACTACAAAGGATCTGGGACAACAGTCCAAGAAATTAAAGGTTGAAGACTCTCAAGTGCCAGCCGCTGAACCTGCTCCTACTCCTGCTACAGTTCCAGATCAGGCTCAGACTCAGACTCAGACTCAGACTCAGGGCCAAGTTCAAGCTCAAGCTCCGGCTCAGGCTGTTTCTTCGTCTCCATCTCTGTCTCCAGCTTCAGCTGCTGTTCCAGCTCCGGCTCCCACTTCTGCATCTGCACCTATCGTGATTTCTGAAGCACTTGCGAAATTCTTGGGTACCAGTGAAAAGGAGATGCTTCAGTCAGAAGTATACAAGCGTATTGAAGAGTACATCAAGGTGGAAGGGTTGGAGGATCCATTGAATTCATTGGTGATATGTGACACAAAGCTTCAAGAACTCTTCGGATGTGAAAGCATCCCTACACCTGGGATTCGTGAAGTGTTAGCCCGCAATCATCTTTTCCAGCGAGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50243.p1 GENE.R_Transcript_50243~~R_Transcript_50243.p1 ORF type:complete len:409 (+),score=107.65,SWIB|PF02201.14|1.1e-27,SWIB|PF02201.14|6.7e-14,DEK_C|PF08766.7|4.7e-06,DEK_C|PF08766.7|3e+03 R_Transcript_50243:2-1228(+)
MASVSDQEIAEGITGLFRETNPNSFTSLNEVILRLQSKLGVVDLSHKVDFIRAQIALFFNSPPPPPAPVVLPQNPPNPNPNLNIPTTNTHHHHHVVHPQHHQHHVTYHQHHPQHQQHHSHFGPGFGGGGPRGPTEISFAQPGGSVLEPHSSPVTAAKESTQARPKRRGGPGGLNKLCGVSPLLQTIVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDSTDMFQMNKLLAKHIVPLDTTKDLGQQSKKLKVEDSQVPAAEPAPTPATVPDQAQTQTQTQTQGQVQAQAPAQAVSSSPSLSPASAAVPAPAPTSASAPIVISEALAKFLGTSEKEMLQSEVYKRIEEYIKVEGLEDPLNSLVICDTKLQELFGCESIPTPGIREVLARNHLFQRA*

Click here to download the sequence:
Link to NCBI Protein BLAST