Transcript Information: R_Transcript_50259.p1


Annotated TAIR IDAT3G56320.1
Annotated Gene NamePAP/OAS1 substrate-binding domain superfamily
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20886193-20888624 | Reverse length=603
E-Value1.8E-139
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8639268214123
Replicate 24.0062578788758
Replicate 35.5831184948839
Condition 2: 8 Hour
Replicate 15.3541515274617
Replicate 25.2320726313638
Replicate 36.1179523260914
Condition 3: 24 Hour
Replicate 16.9385016273145
Replicate 25.31415012266
Replicate 36.401696356892


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50259.p1 GENE.R_Transcript_50259~~R_Transcript_50259.p1 ORF type:complete len:718 (+),score=139.55 R_Transcript_50259:656-2809(+)
ATGTCTAACTCTTGGGCTAAAGTTCGCAGTTATCTTGACTTGATGGATGTTCAAGATCTGAATTTGTCTCTTTCCCTGTCATCTACATCGTCTTCATTCTCTTCAAGCTCTACTTTCGATCTCCATGCTTTATCAATAGGTGCCGAAAGATGGCAGGTGGTTGAGAAGACAACTCAGCAGATTCTGTCCATTATCCAACCTACTTCAGATTCAGAGAAAAGGAGGAAAGAGATCATCGAGTATATTCAAGCACTTATTGAGGATTCTTTTGGCATTAAGGTTTTTCCCTTTGGATCAGTGCCTCTTAAGACCTACCTTCCACATGGAGATGTTGATTTGACCGCACTAAGCCATTGTGATTCCAGCCAGGATTTAGCTGCAGATATTTGTAATCTTCTACGAGATGAAGAGAAGAACAACACTAGCATTCAAGTGAGGAATGTGCTCTATGTTCCTGCACAGGTTAGAGTTGTTAAGTGCACCGTGGGCAATATTGCTGTGGACATATCGTTCAATCAAACGGCTGGACTTTGTGCATTGTACTTTCTTGAGCAGGTTGACCAGTTCATTGGCAAAGATCATCTATTCAAACGTAGTGTCATTCTAATCAAAGCATGGTGCTATTATGAAAGCCGACTCCTTGGTGGATATCATGGTTTGATATCGACATATGCTTTGGAGACTATGGTTTTACATGTAATCAATCATTTCCATTCTTCACTACATTGTCCTTTAGCGGTACTGTATAAATTTTTAGAATACTACAGCACATTTGATTGGGAGAGATATTGCATTGGGATAAATGGTCTTGTATTGATATCCTCCCTTCCTGAAATAGCCGTACGGCCACCACCGGACTCTGATGAAGTACTGCTGACAGATGGTTTTTTGAGGAGCGCTAGAGAAGCATTTTCATTTTATACAGGAGTTCTTGGAATGGCAAGGCCGGCATTTTCAGTGAAGTTCCTTAACATATTGGATCCTCTTAGAGATGACAACAATCTAGGGCGTAGTGTTAGCAAAGGTAGCTTTTATCGAATTAGAAGTGCTCTCTCTTATGGTACTGAAAAGTTGGGTGATGTATTGATCCTACCTCCAGAAAAGATTGAAGAGGGACTTGAAAAGTTTTTTGTCAATACCTTGGAGAGGAGTGGGAGAGGAAAACGAGCAGATGTTCTTAATCCTGTTCCTCCTTATGGCGCTGAAAGTTGTGAAATCTCTTCTGCAAACAGGGACACGGATAACCTTCTTGCTGGTATTCAATATGGCCTCTGGTTTCATGATTATGGTATGATATACCCACTACAGCCTAGTAGACCAGCACCCCCTCATGTCTGGACTAACAGATGGATGGAAATGGGTCATAATGTACATTATGATCAGAACATGTATTATAACGTGGGCAAAAGCCCGCCCTCTTCAGTCAATAGTCCCACAGGTCTCCAACTAGCCAAGGTGGCTTCCATTGAAGAAAAGCGCAAATCTAAAGGAACTGGACCTTACATTCCTCACTTTGATCATTTTCTGCAAAATGGTGTTGATATGGAGGAAAATGGAAAAGAATGGGAAAGTGGGAAGGAGGTTGGAAGAGTGGACTCCCAGACTTGCATGCATAAAGAAGAAACTTTTGTAGATGAGGGTGTAGGCACTTGTGTCTTCCAGTTCACAGTTGAAGAATTCCCTGTTCTTCCTGGAAGTAAACCCATACCAATAAAGGTCAGCCATTCTGTGTCTTCAGTTTCAATGTATGAGCAGGCGAACGACTCAACATCATCCGAAAGCCTTGAATTTGGAAGCCTGAAACATTCATCACCCAGATCTCTGTCATTGTCAGAACCAGGCAAGCAGTCCGATTCTGATGTATTAGTTACTCTGGACTCTTTAAACGAGCCATCTGTCGCAGTAGAGGAAGACCAGGAATCATCTAAGAGCGAGGAAAAATTGGTGATCCCTGTGCAGCCTCTGGAGCTGACAGATGAGAAGGAGTTTCCACCTCTGATCCGGCCGCCAAAAGCTAAACCTGAGATAAGGATTAATAAGAAGGAATTCCCCCCTCTTGGTGCTGCTGTGAAATCAGAGAAAAGGAACAAGTGGAAAAGGAATTCCAAAGAGAACAAACGGGAGAAATGGATGGGGACGAGTACATCAATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50259.p1 GENE.R_Transcript_50259~~R_Transcript_50259.p1 ORF type:complete len:718 (+),score=139.55 R_Transcript_50259:656-2809(+)
MSNSWAKVRSYLDLMDVQDLNLSLSLSSTSSSFSSSSTFDLHALSIGAERWQVVEKTTQQILSIIQPTSDSEKRRKEIIEYIQALIEDSFGIKVFPFGSVPLKTYLPHGDVDLTALSHCDSSQDLAADICNLLRDEEKNNTSIQVRNVLYVPAQVRVVKCTVGNIAVDISFNQTAGLCALYFLEQVDQFIGKDHLFKRSVILIKAWCYYESRLLGGYHGLISTYALETMVLHVINHFHSSLHCPLAVLYKFLEYYSTFDWERYCIGINGLVLISSLPEIAVRPPPDSDEVLLTDGFLRSAREAFSFYTGVLGMARPAFSVKFLNILDPLRDDNNLGRSVSKGSFYRIRSALSYGTEKLGDVLILPPEKIEEGLEKFFVNTLERSGRGKRADVLNPVPPYGAESCEISSANRDTDNLLAGIQYGLWFHDYGMIYPLQPSRPAPPHVWTNRWMEMGHNVHYDQNMYYNVGKSPPSSVNSPTGLQLAKVASIEEKRKSKGTGPYIPHFDHFLQNGVDMEENGKEWESGKEVGRVDSQTCMHKEETFVDEGVGTCVFQFTVEEFPVLPGSKPIPIKVSHSVSSVSMYEQANDSTSSESLEFGSLKHSSPRSLSLSEPGKQSDSDVLVTLDSLNEPSVAVEEDQESSKSEEKLVIPVQPLELTDEKEFPPLIRPPKAKPEIRINKKEFPPLGAAVKSEKRNKWKRNSKENKREKWMGTSTSI*

Click here to download the sequence:
Link to NCBI Protein BLAST