Transcript Information: R_Transcript_5044.p1


Annotated TAIR IDAT1G27750.1
Annotated Gene Namenucleic acid binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9657425-9661750 | Forward length=1075
E-Value5.4E-224
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2812459168826
Replicate 23.6226679128391
Replicate 31.7588732571571
Condition 2: 8 Hour
Replicate 13.8708458588689
Replicate 23.4137208953571
Replicate 33.1810410662647
Condition 3: 24 Hour
Replicate 13.31820158666
Replicate 22.8291298667227
Replicate 33.6578368266269


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5044.p1 GENE.R_Transcript_5044~~R_Transcript_5044.p1 ORF type:5prime_partial len:1107 (+),score=267.32,SPOC|PF07744.9|7.1e-14 R_Transcript_5044:3-3323(+)
GAACCTCCGCCACCTCCTTCACAGCCGCCTCCACCGCCACCGCCACCACCACCTCCGCCACCAAAAGAAAATGACGAAGCAATCATTGCCCCGCCCCAAACTCCACCGCCATTATCTCACGAAGAAGTTCTTCAAAGACGAAGGAATCAAGAAGAAATTCGGAGTGTATACGAGAATTACAAAACCATCAAGCGTTGTATTTCATTAGGAAAAGACGCTCGTCATATGCCGGAGCTTGAACAAGCTTATCTCTCTCTCATATCTGCTTCTCGAGGTTGTGCAAGTGTTCAGCGTATCTTATCTGAATTTATCCCTCGGTATGCATCATTCTGCCCTACTGCTCTTGAAGCTGCAGCACAAGTTGTTATAAATATGCACAACTGGAATATGCCTGTGATAAGCAGAGGAGAAGATACAGATGGAGTTTCATTTGAGACTGCTAATAATTGCATTGCCGGTCTGGTGGACATCTGTCATGCTGCCTCCTTGGAGGCACCTTCATCATCTGTTATCAGAGGCATCTGCTCTGTAGTATTCCTCAATGTTGCTACATTCTTTGCATCCTCTTTGGATGGTAAAGATATTTTCCAAATTATAGATAAAGAATGTCTAAACATTCATCATTCAACAAAGACATTTGCTCATATGACGCAGAAGGTCCTAAAAGAAGATGCTTCCGCATTTGATAGGTTGTTGAAGTTTCGGGCTTTATGTCTTCTAAGGATCTTCTTTCTTTGCCCTAAAGATTTAATTGTTGCTTGTTTTGAGCTCTTTGGAACCAATGCTGCAGATGGATTTTGTAGGGAAGGAAAATACTTCCTCAGTCAGCTGTCAGGTACACTTACATTCAATACTGATGAAAGAGTCCATTTTCTCGATGCAAAAGGAAGATCTGGTGGTCCTGAAGCTAGCGCAAGTTGTATGCTGGTGGATGGTGCAAAGACTGACATTAATGACAAGAGCCCAGAGTCTGATCATGACCACCTTTATAAAGATGAACAAGATTTACTGAAAAGCTGCTTGCTAGAACTGGTCCTTCGCAGGAATCCTTCCTTGAAGAAATGGGTATTCTCTAGGTACCAGAGGCTCCAGAGATCAGCATCTTCTGAAGCTGTGTCTCAAGTCAGTACTGCTTTTGAAGGAATCTTCCAGTCTTTTAGCAAACTAGTTAAATTAACAGACAATGTAGCAGACAGCGATGAAGATGGTTCAGATTCATCCAAATATGTTAGCAGACAATACTTGGTGCATAGAATATCTGATCAACACAGACCCACATGTGAGGTAACTGGAAAAGATTCTGCTTTACAGCCTCATGACAAATTCTGCAAGGATGAGTTCATGAACAAAATTTCAGAAATCAGGACTGATGCCTATGAAGACGGAGGTCAAGCACACCAGCTAGCGCCAAATGCAAGTTCCTTGAGGTTCTCAAGTGGGCTTCTAGGTAATGCTGTGTTTGGAAGCCATCCAGCAGCATCTTATCCGTCTGCATCGAACCAGATTGTTTGGTATTCTGATGGAGACCCTGGAGCAATGGATGTGTTTTCAGCTTCCAAACAGCTCTGGTTAGGTTCTTTGACCCCTGACACAGCTGAGGCTGCTGTGAGGTATGAAATTGAAAGATTTGGTCCTACAGAAAATTTTTCATTCTTTCCCGCTAAAGGATTCGCACTAGCTGAATATAGAAACATTATTGACGCCATCAAGGCTCGAGAATTCATGAGAAGATGTTCTTCCTGGGGCTATCCTGTTCGTGTCAAATTCATTGATGTTGGGTTGGGAACCAGGGGTGCTGTGGATGGTGTGGCCTTTGGTTCTAGTTGTCATGTTTTTGTGGGCAATGTGCTGAACCAGTGGATGAGGGATGAGATTATGCGAGAAACTATGAAAGCAAGTTGTAAAGGCCCTCGTCTGGTTTCTGAGTTGACAAATGAAAGTGCATTAATCTTGGAGTTTGAGAATCCTGAAGAAGCTGCAAATGCGATGGCAAGTATACGACAGTATCGTAGAGGGTGTAATAGTTTTACAGGGGCTGTTGGTGCCGGTCTATCTGATATGTCAAGATCACGTCCTGGTTTTTGGAATGCGATGCCTGCTCCTGTCAGTGCTGCCTTAGGAAATATGGGTAACAACAATTTTCTTGGTTCACCTCATGGTCAAACAGTTGAAAGCCCAGCTAACAGGATGCATAATATTGCTGTACCTTTTAAGATCAACCCTGAAGGCATTGCTCCAGAGTTCACATCCCCTAGAGCAGGTTTTGAGCAGCATGGATTGACTATGCGAGGTGGCCAAGTATCTCAATCAAATATCATAGCATCTGGTTGCACTGAGACTCCGGGGATAGGAAACATCAGAGGTTCTATGCCTGGCCCGTCAGAACAGATGTGGATGTATCAGAAACCAGATTTTGAACTCCAGTCTGCAGCAGGAACTGTTCAAGGCACACCCATGGTCACACAAGGACCTCCACCACCTCAGCCTATTCAAGCACCACCTTACATGCGACCTGCTTTTCCTCCACCTACCAGTTCCTGGGATCCTCATAGCCATATGCCTCTTAACTCCATTTCTCCGAGAGTTATGCCTTCTAATGTACATGGTAACTCCATCCCTGCTTTGCTCCAAGGTTCAATGACTCCATTGTCACTGATGCCATACAGTCAAATGGTTCCCCAACCGATTGTACCACCTCTTGTACCATCAATTCCACAACCTCAACATGATATGCTTCCTCCATTGCCACCTTCTCCACCTATGGTCCCCCCTCCACCTAGTTCTCCTCCTCCACCTCCACCCCCACCTGCTGGTGACCCAACTCCACCTAGTTCTGAGCTTTCAAAAATGGTTACTGCAGGAGGCAGCTCGCAGATTCAGTGGCAGGGAACACTGTCAAAAAGTGGAGTCCATTATTGTACTATTTTTGCCCATAGAATTAATTCAGATGTTTGTAAATATTCAATATCTCTCTCAGAGCCTGCTGGGTGGCCAGCAAAATTGGACATGACAAAACGCACAGATCTTCGTCATGTTAAGGCGACATTTACTAGTACCCCTCCATACAGGAGGGAGGTATGCCAGTTGCTGCCATCTTCAGCTGCTGATCAGAAAGGATTTCAGGATTTTATCTCGTACTTGAAGCAGAGAGAGTGTGCCGGAGTGATTAAGATCCCAGCTATGAAATCTGTATGGGCCAGGCTACTATTTATTTTACCATATTCTCCAGAGACCTGTTCGATGCTTTCAATTAAGCCAAATGACTCAGATGGCCTTGTTGCTGTGGTTTTGCCGAAGGAGGCAAATTCAGAATGCACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5044.p1 GENE.R_Transcript_5044~~R_Transcript_5044.p1 ORF type:5prime_partial len:1107 (+),score=267.32,SPOC|PF07744.9|7.1e-14 R_Transcript_5044:3-3323(+)
EPPPPPSQPPPPPPPPPPPPPKENDEAIIAPPQTPPPLSHEEVLQRRRNQEEIRSVYENYKTIKRCISLGKDARHMPELEQAYLSLISASRGCASVQRILSEFIPRYASFCPTALEAAAQVVINMHNWNMPVISRGEDTDGVSFETANNCIAGLVDICHAASLEAPSSSVIRGICSVVFLNVATFFASSLDGKDIFQIIDKECLNIHHSTKTFAHMTQKVLKEDASAFDRLLKFRALCLLRIFFLCPKDLIVACFELFGTNAADGFCREGKYFLSQLSGTLTFNTDERVHFLDAKGRSGGPEASASCMLVDGAKTDINDKSPESDHDHLYKDEQDLLKSCLLELVLRRNPSLKKWVFSRYQRLQRSASSEAVSQVSTAFEGIFQSFSKLVKLTDNVADSDEDGSDSSKYVSRQYLVHRISDQHRPTCEVTGKDSALQPHDKFCKDEFMNKISEIRTDAYEDGGQAHQLAPNASSLRFSSGLLGNAVFGSHPAASYPSASNQIVWYSDGDPGAMDVFSASKQLWLGSLTPDTAEAAVRYEIERFGPTENFSFFPAKGFALAEYRNIIDAIKAREFMRRCSSWGYPVRVKFIDVGLGTRGAVDGVAFGSSCHVFVGNVLNQWMRDEIMRETMKASCKGPRLVSELTNESALILEFENPEEAANAMASIRQYRRGCNSFTGAVGAGLSDMSRSRPGFWNAMPAPVSAALGNMGNNNFLGSPHGQTVESPANRMHNIAVPFKINPEGIAPEFTSPRAGFEQHGLTMRGGQVSQSNIIASGCTETPGIGNIRGSMPGPSEQMWMYQKPDFELQSAAGTVQGTPMVTQGPPPPQPIQAPPYMRPAFPPPTSSWDPHSHMPLNSISPRVMPSNVHGNSIPALLQGSMTPLSLMPYSQMVPQPIVPPLVPSIPQPQHDMLPPLPPSPPMVPPPPSSPPPPPPPPAGDPTPPSSELSKMVTAGGSSQIQWQGTLSKSGVHYCTIFAHRINSDVCKYSISLSEPAGWPAKLDMTKRTDLRHVKATFTSTPPYRREVCQLLPSSAADQKGFQDFISYLKQRECAGVIKIPAMKSVWARLLFILPYSPETCSMLSIKPNDSDGLVAVVLPKEANSECT*

Click here to download the sequence:
Link to NCBI Protein BLAST