Transcript Information: R_Transcript_50446.p1


Annotated TAIR IDAT5G47490.1
Annotated Gene NameRGPR-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19264675-19270487 | Forward length=1361
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.632643197978
Replicate 27.1970732594913
Replicate 310.907216450414
Condition 2: 8 Hour
Replicate 111.574520818186
Replicate 213.444344990899
Replicate 319.769826079979
Condition 3: 24 Hour
Replicate 115.960991065011
Replicate 212.117436639951
Replicate 314.642224006162


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50446.p1 GENE.R_Transcript_50446~~R_Transcript_50446.p1 ORF type:complete len:1447 (+),score=384.65,Sec16_C|PF12931.3|4e-56,Sec16|PF12932.3|2.3e-19 R_Transcript_50446:647-4987(+)
ATGGTGTCAAATCCTCCATTTGAGTTGGAGGATCAGACGGATGAGGATTTCTTTGATAAGCTTGTGAATGATGATGATGATGTTGTTGGTGGTGGGTTGAAGAGTTCTACTAGCACTGGTTTGGTGAAAACACTTGATGTGTCAGATGGTGATGAGTCTGATGAAGTCAAGATGTTTGCTAATTTGACCCTAAGTGAGGGTGGTAATGGTATTAAAAAAGAAGTTGAGGGTGGTAGTGTAAATGACGGTTCAAAAGTCGAGGGAGGAGGGGAGAAGGGTGTGGAAGTAAAGGAACAGTCTCCTCCTCGGGATGATGATAAGGTTGGGGGTTTGAGAGTGGAGGAGCCAATTAAGGAAGAATCTGTTGGAGATGGGGAGGTAACTAATCCACTATTGTCGTCGAATTCTATTTCTTTTGGCAATGGGCATGTGTATAAAGATGGGGGGGCTATGACTACCGAGGCCACTTCTTCGAGATTGAAGAGTGAGAGTAGTGGCTCAGTGACTGGTGGTGTTAAGGAGGTCCAGTGGACTTCTTTCAGTGAGACGGCTGAGCTTGGTGATGATAGTTTCGGAACCTACACGGATTTTTTTACTGGTGTAGGAGATGAGGGTGTGGACAATCTTCATAGTGAAGCTAAGGGTTTATTGGGAAATGAAGCTACTAAGATGAGTAGTGCAGAAGGTTTACATAGTCATGCTGAGTATCAAGGTGGCAATGTGATTGTTGCCGAACAAAGTGGAGGTAGTGTAGATACAAACAATCCTGAGTATTGGGAGAGTCTCTATCCTGGATGGAAATATGATGCAAACACTGGTCAATGGTATCAATTGGATGGTTCTGATGGAACACCAAATGGACTGGAGAATTCTGCTTCTTCCCTTGGAAACAGGCAAGGAAGTTTTGATGTGGCCGGAGATAGTCAATGGGCTGTTTCTGATGTTCAAACATCTCAAGTTTCTTATGCACAACAAACTGCTCAATCTGATGTGGGAACTGGTAGTCAGATTAGTACAGCTGAAAATGTGTCTGATTGGAATCAGATCTCTCAACAGAATGGGGAATATCAGTATCCAGCTCATATGGTTTTTGATCCCCAGTACCCTGGATGGTATTATGATACAATAGTACAAGAGTGGCGTTCTTTGGAAACATATCATTTGGCAGCTGAGTCAACAGATCAGACTCATCAGAGTCATGATCAGCAGGCTCCAAACGGGTTTGTCACTGCAGCAGCTTATTCTCATGGTACTAACCAGAGCATTAATAATGATGTGGTGCAAGGTGTCAGGAGTGAAGGCCTCAATCAAAGTTGGGTGACGTCCTTTGGAGATTATAGCCAGCAGGTTACGAATGCCCATCAGTCTGAAGCTGCTGTGGAGAGTAGGTCTGCTGTCAATTATATTGGCGGCCTATCAAGTCAAGGGTCCTATGATTCTAATATTTACTCAGAAAGCCATGTAGGCCAGAACAAGCCTGTTGGTTCTTTAGAAACAGTTGCATCATATGACAAAACAAATTGGAATTATGATAGTTCAAGCTGGGCTGGTGGGTTACAAAGCTTTGTTCCTACTGATAATGCTCTGCAGCAGTTCAGTCATACTCCACAAGGACAGCAAAATGGACCAGTGCAATACGCCAATGAGTATTATGGTGGTCAAAATACTGCTACTGTTTCTCAACCCTTCCTTCCTAACGGCCACCATGTTCCTTATGCACCAAGTGAGGGTAGATCATCAGCAGGTCGTCCTCCACATGCTCTGGTTACCTTTGGGTTTGGCGGGAAGCTTGTGGTCATGAAAGATAACAGTTCTGGTGGATTGTCATCTTTTGGAGGCAAGGGTTCTGATGGACACTCTATATCTGTCCTTAACTTGATGGAAGTTGTGGATGTGAACAATATTGCTGGCACTGCGTCTGGTGATTGTAGCTATTTCCATTCATTATGCCACCAATCCTTTCCTGGTCCCCTAGTTGGGGGGAATGCTGGAACTAAGGAGCTGAATAAATGGGTTGATGAGAGGATAACACACTATGAATCATCGTATATGGATTATGGTAAAAGCCAAGCTCTGAAGCTGCTTCTGTCCTTACTAAAAATAGCATGCCAACACTATGGAAAACTACGATCGTTTGGAGCAGACAGTGGAATTATGGAAAATGATCTTCCAGAATCAGCAGTTGCCAAACTCTTTGCTTCTGCCAAAACAAATGGTGCTCAGTTTGGTGGGGACTACAGTGCAATTAAAAAGTGCTTCACGTCATTGCCTTCAGAAGCACAACTTCAGGCTACTGCTAGTGAGGTACAAAACCTTCTGATATCTGGTCGAAAGATGGAGGCTCTACAGTGTGCTCAAGATGGTCAACTTTGGGAATTTGCTCTAATTCTTGCCCGACAACTTGGTGACCAGTTTTATGCCGATACTGTAAAGCAGATGGCAGTCAGCCAACTAGTAGTAGGTTCACCATTGAGAACCTTGTGCCTTTTAATTGCAAAGAAACCAGAAGAGGTATTCTCCGCCAACAACATGGCTGCTACTAGCATTCCTGGAGCAGTACATACGTTGCCACAATCTGCACAGAATGTCGGTTCTAGTATGCTGGACAATTGGGAGGAGAATTTGGCTGTAATAACTGCGAATAGAACTGAGAATGATCACCTCGTGATTATTCATCTAGGAGATTGTCTGTGGAAGGAGAAAAATGATGTTATTGCTGCACATATATGTTACTTAATTGCCGAGCCCAATTTTGAGTTGTATTCAGACAGTGCAAGATTGTGTCTTATTGGTGCTGACCACTTGAACTTTGCACGGACATATGCTAGTCCTGAGGCTATTCAGAGAACAGAGGTTTTTGAGTACTCAAAGGCTCTTGGGAATTCTCAGTTTGCCCTCCTTCCTCTTCAGCCCTACAAACTTGTCTATGCTCACATGCTTGCCGAAGTTGGGAGGGTTTCTGATTCGTTAAAATATTGTCAAGCAATTTACAAATCCTTGAAAACCGGGAGATCGCCGGAGACCGACATGTTAAAGCAGTTGTTAACATCTCTTGAAGAGAGGATTAGGTTCCACCAACAGAGTGGATATGCAGCTAACTTAGCTCCAGCAAAAATTGTGGGTAAATTGCTCAACTTTTTTGACAGCACAGCTCATCGTGTTGTTGGTGGGCTGCCACCACCTGTTCCCCAAGCAACTCAAGGTAGTGTTCAAGGCAATGAACTTCATTTCCAGACATTAAGCGCGAAGGTATCAAGCAGTCAATCAACCATGGCTATGTCATCATTAACACCGTCAGCATCCATGGAGCCCATAAGCCAATGGGCAGTAGATGGTAGTAGAATGACATTACAAAATAGAAGCATTTCTGAACCTGATATTGGCAGAACTCCTAAGCCGGAGCAGATGGGTTCAGCAAAGGAAGCATCTGCTTCCAGTACAGAAGGAAAACCATCTGCCACAACAGGGACATCTCGCTTTGGCCGTTTCAACTTTGGGACACAGATCTTGCAAAAGACTGTTGGTTTGGTGTTAAAGCCTCGTCAAGACCGCCAGGCTAAATTGGGGGAAACAAATAAATTCTATTACGATGAGAAGCTAAAGAGATGGGTAGAGGAAGGTTCTGAACCACCTGCCGAAGAGACGGCCCTTGCACCACCACCGACTACTGCAGCCTTCCAAAGTGGGAAGTCAGATTATAATTTGAACAATGCTTTAAATGGAGGGTTGCATGCCACTGATCGTAGCCCGGATTCTACAACCTCAGCTCCTCCTGGAAGCAGTCCTGGGATCCCAGCCATCCCTTCCAGCTCAAATCAATTTTCAGCTCGTGGGCGGATGGGTGTCCGGTCAAGGTATGTGGATACTTTCAACAAGGGTGGTGGCGCCTCGACAAATATGTTCCAGCCACCATCTGTTCCATCAGCAAAACCTGCTAGTGTTGCTGGTGCCAAGTTCTTTGTCCCCACTGCAGTTCCATCAAACGATCAGACCATAGGCACAGAAGCTGGAAGCAGGGAGGAAGTTCCTGAAAGTGGAGGAAATCCTTCTACGCCCATGAATGACCCTCTGCAAAACCTAGCACCTTCACCTGCAGGAACAATGCAGAGGTTCCCTAGTGTTGATAACATTCCCAACAAGGGTACAATGGGAAGTAGGAATAGCTCCCTTGCATCCCAGTCTCGACGTACAGCTTCATGGAGCGACATTCGTAGCGATACATATGCTCCATCAACAAGTGGAATGTCCCCAGTTCCATTTATGCCTAGTGATCACTCTTTGTCTAGTCCGCCCATGAATGGAGGCAATTTCGGGGATGATCTCCAAGAGGTCGAACTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50446.p1 GENE.R_Transcript_50446~~R_Transcript_50446.p1 ORF type:complete len:1447 (+),score=384.65,Sec16_C|PF12931.3|4e-56,Sec16|PF12932.3|2.3e-19 R_Transcript_50446:647-4987(+)
MVSNPPFELEDQTDEDFFDKLVNDDDDVVGGGLKSSTSTGLVKTLDVSDGDESDEVKMFANLTLSEGGNGIKKEVEGGSVNDGSKVEGGGEKGVEVKEQSPPRDDDKVGGLRVEEPIKEESVGDGEVTNPLLSSNSISFGNGHVYKDGGAMTTEATSSRLKSESSGSVTGGVKEVQWTSFSETAELGDDSFGTYTDFFTGVGDEGVDNLHSEAKGLLGNEATKMSSAEGLHSHAEYQGGNVIVAEQSGGSVDTNNPEYWESLYPGWKYDANTGQWYQLDGSDGTPNGLENSASSLGNRQGSFDVAGDSQWAVSDVQTSQVSYAQQTAQSDVGTGSQISTAENVSDWNQISQQNGEYQYPAHMVFDPQYPGWYYDTIVQEWRSLETYHLAAESTDQTHQSHDQQAPNGFVTAAAYSHGTNQSINNDVVQGVRSEGLNQSWVTSFGDYSQQVTNAHQSEAAVESRSAVNYIGGLSSQGSYDSNIYSESHVGQNKPVGSLETVASYDKTNWNYDSSSWAGGLQSFVPTDNALQQFSHTPQGQQNGPVQYANEYYGGQNTATVSQPFLPNGHHVPYAPSEGRSSAGRPPHALVTFGFGGKLVVMKDNSSGGLSSFGGKGSDGHSISVLNLMEVVDVNNIAGTASGDCSYFHSLCHQSFPGPLVGGNAGTKELNKWVDERITHYESSYMDYGKSQALKLLLSLLKIACQHYGKLRSFGADSGIMENDLPESAVAKLFASAKTNGAQFGGDYSAIKKCFTSLPSEAQLQATASEVQNLLISGRKMEALQCAQDGQLWEFALILARQLGDQFYADTVKQMAVSQLVVGSPLRTLCLLIAKKPEEVFSANNMAATSIPGAVHTLPQSAQNVGSSMLDNWEENLAVITANRTENDHLVIIHLGDCLWKEKNDVIAAHICYLIAEPNFELYSDSARLCLIGADHLNFARTYASPEAIQRTEVFEYSKALGNSQFALLPLQPYKLVYAHMLAEVGRVSDSLKYCQAIYKSLKTGRSPETDMLKQLLTSLEERIRFHQQSGYAANLAPAKIVGKLLNFFDSTAHRVVGGLPPPVPQATQGSVQGNELHFQTLSAKVSSSQSTMAMSSLTPSASMEPISQWAVDGSRMTLQNRSISEPDIGRTPKPEQMGSAKEASASSTEGKPSATTGTSRFGRFNFGTQILQKTVGLVLKPRQDRQAKLGETNKFYYDEKLKRWVEEGSEPPAEETALAPPPTTAAFQSGKSDYNLNNALNGGLHATDRSPDSTTSAPPGSSPGIPAIPSSSNQFSARGRMGVRSRYVDTFNKGGGASTNMFQPPSVPSAKPASVAGAKFFVPTAVPSNDQTIGTEAGSREEVPESGGNPSTPMNDPLQNLAPSPAGTMQRFPSVDNIPNKGTMGSRNSSLASQSRRTASWSDIRSDTYAPSTSGMSPVPFMPSDHSLSSPPMNGGNFGDDLQEVEL*

Click here to download the sequence:
Link to NCBI Protein BLAST