Transcript Information: R_Transcript_50486.p1


Annotated TAIR IDAT1G76070.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20310.1); Has 66 Blast hits to 66 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:28546617-28547435 | Forward length=272
E-Value9E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39113487760112
Replicate 20
Replicate 30.32723910851646
Condition 2: 8 Hour
Replicate 10.34979807067493
Replicate 21.2777646766392
Replicate 30.25930872314838
Condition 3: 24 Hour
Replicate 10.81992168670372
Replicate 20.78768781752062
Replicate 30.46902224329066


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50486.p1 GENE.R_Transcript_50486~~R_Transcript_50486.p1 ORF type:5prime_partial len:140 (+),score=34.17 R_Transcript_50486:2-421(+)
GAAAAGCCGAAGAATCCGACGATCACGACACCGAATCAAGCACAGACTCCGACGAAGAAGAAGAAGAAGAAAGGAGGTCATGATATTGGAGTGCCAAGCTTGGGAAATATGAAGAAATATGCTAGTGGACGAGAAACATTAGCAAACTTTGATTGGACGGCTCAGATTGCTCCGATAGATCATGATCATGATCGAGATTGTTACTCTGATGAAGAAAGAAGAAGAGACAGCAGTGAAGGTGAAGAAGAAGAAGAAAGAGAAGTTATTATTCCATATTCAGCACCTATTTTGTTAGGTGGGAGATCAACAAGAGGAGGAGGAGGGTACTTAGGTAATTTACAGCCAAGGAAGGAAGTTAATCTTTGGAAAAGGAGGACTTTGGCTCCACCTCCCCCTCTTGCATTAAATTCCAAAGGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50486.p1 GENE.R_Transcript_50486~~R_Transcript_50486.p1 ORF type:5prime_partial len:140 (+),score=34.17 R_Transcript_50486:2-421(+)
EKPKNPTITTPNQAQTPTKKKKKKGGHDIGVPSLGNMKKYASGRETLANFDWTAQIAPIDHDHDRDCYSDEERRRDSSEGEEEEEREVIIPYSAPILLGGRSTRGGGGYLGNLQPRKEVNLWKRRTLAPPPPLALNSKG*

Click here to download the sequence:
Link to NCBI Protein BLAST