Transcript Information: R_Transcript_50490.p1


Annotated TAIR IDAT5G53800.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21848180-21849935 | Forward length=351
E-Value4.5E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.705964757276
Replicate 232.593094250881
Replicate 328.899779409099
Condition 2: 8 Hour
Replicate 129.46845374465
Replicate 236.726448372877
Replicate 334.614699322598
Condition 3: 24 Hour
Replicate 139.975949213357
Replicate 234.429284954186
Replicate 334.167725049023


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50490.p1 GENE.R_Transcript_50490~~R_Transcript_50490.p1 ORF type:complete len:344 (+),score=103.52 R_Transcript_50490:230-1261(+)
ATGGCGAGAGAGCGAGACGAGAAACATGAGAGAGAAGAGCGAAGAGAATTAGAACATGGAGACGACGTTAAACCTAAACCTAAACCGAAGCATCGAGACGACAGAAAATCGTCCAAGAGAAAAGCCGAAGAATCCGACGATTACGACACCGAATCAAGCACAGATTCCGACGAAGAAGAAGAAGAAGAAGAAAGGAGGCACAGAAGAAGCAGGAGGAAGCGGAGATCGTCGAAACGACGTCACAGCTCGGAATCGGAATCAGAAACCGAGTCAGGTACTGAGTCGGAATCGGACGAGTCGGAGTCAGGATCGGAGAGCGAGAGCGAGGAGGCGAGGAGGAGAAGGAAGAAGAAGGAGAGGAGGAGGAGAGAGGAGAGAGAGAGGGAGAGGAGGAGGAAGAGAGAGAAAGAGAAGAAGAGGAGGAGGAGAGAGAAAGAGGAAGAGAAGAGGAAGAAGAAGAAGAGGAGAGAGAAAGAGGATAAGAAGAGAAGGAAGAGTAAAGAGAGGGAGAAGGAAGGGAAGACTGGTGCTGTGACGAATTTGTGGGGGAAGTATGGGATTATCAGAGATATTGATATGTGGAATAAACGACCAGAGTTCACTGCATGGCTTGCTGAAGTAAAGCAGGTGAATCTGGAAAGTCTACCTAACTGGGAAGAGAAGAAGATGTTCAAAGAATATATGGAGGACTACAACACAGCTACGTTTCCTTCGAAAAAGTATTATGATCTTGATGTTTATCACAAACATAAGATGGAGAAAGAGATGAAAAAGGGTTTGAAGAAGGTTGTACAAAAGGAACGCACTGTATTTAATGATGAAGAACAGCGTCGGCAAGAATTGATGCAGGCGCGTGAAAAACAAAAGGAACAAGAGGTGGAAGCGTTGAAGCACGCTATGAAGAGCGGAATGGCACAAGCAATGAAAGAACAGGCTCAGCTCAGAGAAGAGATGGCTTACTTGTTTAAAATCGGAAACCACGAGGCCGCAGCTGCTATACAGAAAAAATTGGATCCAGATGTTGCCATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50490.p1 GENE.R_Transcript_50490~~R_Transcript_50490.p1 ORF type:complete len:344 (+),score=103.52 R_Transcript_50490:230-1261(+)
MARERDEKHEREERRELEHGDDVKPKPKPKHRDDRKSSKRKAEESDDYDTESSTDSDEEEEEEERRHRRSRRKRRSSKRRHSSESESETESGTESESDESESGSESESEEARRRRKKKERRRREERERERRRKREKEKKRRRREKEEEKRKKKKRREKEDKKRRKSKEREKEGKTGAVTNLWGKYGIIRDIDMWNKRPEFTAWLAEVKQVNLESLPNWEEKKMFKEYMEDYNTATFPSKKYYDLDVYHKHKMEKEMKKGLKKVVQKERTVFNDEEQRRQELMQAREKQKEQEVEALKHAMKSGMAQAMKEQAQLREEMAYLFKIGNHEAAAAIQKKLDPDVAM*

Click here to download the sequence:
Link to NCBI Protein BLAST