Transcript Information: R_Transcript_50500.p1


Annotated TAIR IDAT3G58730.1
Annotated Gene Namevacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21718495-21719280 | Reverse length=261
E-Value4.7E-152
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 187.977873107418
Replicate 284.78965761984
Replicate 390.310471212417
Condition 2: 8 Hour
Replicate 178.054557992751
Replicate 294.926655479056
Replicate 396.669497173708
Condition 3: 24 Hour
Replicate 195.965393430748
Replicate 289.573082084337
Replicate 394.259693747405


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50500.p1 GENE.R_Transcript_50500~~R_Transcript_50500.p1 ORF type:complete len:261 (+),score=71.46,ATP-synt_D|PF01813.13|5.2e-71 R_Transcript_50500:190-972(+)
ATGTCAGGCCAAACCCAGCGCCTCAATGTGGTGCCAACCGTCACCATGCTTGGAGTCATGAAAGCTCGTCTTGTTGGTGCAACAAGAGGCCATGCCCTCCTGAAGAAGAAGAGTGATGCTTTGACTGTCCAATTTCGTTCAATTCTCAAGAAGATTGTATCTACGAAGGAATCTATGGGTGATGTGATGAAAACATCCGCTTTTTCTTTAACTGAAGCTAAATATGTTGCTGGCGAAAATGTCAAACATGTTGTCCTTGAGAATGTCAAAAATGCGTCCCTTAAGGTTCGATCTCGGCAAGAGAATGTTGCAGGGGTGAAACTTCCTAAGTTTGAGCACTTTACCGAGGGTGAGGTTAAAAACGATCTCACTGGATTGGCCAGAGGTGGACAGCAAGTGCAGCAGTGTCGTGTAGCTTATGTGAAAGCCATTGAGGTTCTTGTGGAGCTTGCTTCTCTTCAAACGTCGTTTTTGACACTTGATGAGGCTATCAAGACAACAAACCGCAGGGTGAATGCCCTGGAAAATGTTGTAAAACCGAGGTTAGAGAACACTATCACTTACATCAAGGGAGAGCTGGACGAGCTAGAAAGAGAAGACTTTTTCAGGCTGAAGAAGATACAGGGTTTTAAGAAGAAGGAGATTGAGAAACAGCTTGCGGCTGCCAAGCTGTTTGCTGAAGAGCAGCTTGAAGAAAAGATTTCACTCGAGAGGGGGATATCAGTAAATGCAGCTCACAATTTGTTGGAAAAAACAGAGAAGGATGAGGACATAATCTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50500.p1 GENE.R_Transcript_50500~~R_Transcript_50500.p1 ORF type:complete len:261 (+),score=71.46,ATP-synt_D|PF01813.13|5.2e-71 R_Transcript_50500:190-972(+)
MSGQTQRLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRSILKKIVSTKESMGDVMKTSAFSLTEAKYVAGENVKHVVLENVKNASLKVRSRQENVAGVKLPKFEHFTEGEVKNDLTGLARGGQQVQQCRVAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTITYIKGELDELEREDFFRLKKIQGFKKKEIEKQLAAAKLFAEEQLEEKISLERGISVNAAHNLLEKTEKDEDIIF*

Click here to download the sequence:
Link to NCBI Protein BLAST