Transcript Information: R_Transcript_50506.p1


Annotated TAIR IDAT3G58730.1
Annotated Gene Namevacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21718495-21719280 | Reverse length=261
E-Value6.4E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 177.703367919686
Replicate 294.272545644262
Replicate 384.267355976207
Condition 2: 8 Hour
Replicate 171.195848280343
Replicate 269.956333149733
Replicate 381.208410566711
Condition 3: 24 Hour
Replicate 192.753229201086
Replicate 2111.33919849581
Replicate 380.342819613752


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50506.p1 GENE.R_Transcript_50506~~R_Transcript_50506.p1 ORF type:5prime_partial len:249 (+),score=73.05,ATP-synt_D|PF01813.13|6.7e-72 R_Transcript_50506:1-747(+)
GTCACCATGCTTGGAGTCATGAAAGCTCGTCTTGTTGGTGCAACGAGAGGACATGCCCTCTTGAAGAAGAAAAGTGATGCATTGACTGTGCAGTTCCGTCAGATCCTCAAGAAGATTGTATCCACAAAGGAATCAATGGGGGATGTAATGAAGACATCTTCCTTTTCCTTAACTGAAGCCAAATATGTTGCTGGTGAAAATGTTAAACACGTTGTCCTTGAGAATGTGAAAAGTGCTTCCCTTAAGGTTCGCTCTAGGCAAGAAAACGTTGCCGGGGTCAAGCTCCCCAAGTTTGAGCACTTCAGTGAGGGAGAGACTAAAAATGATCTCACTGGATTGGCTAGAGGTGGCCAGCAAGTGCAGCAGTGTCGTACTGCTTATGTGAAAGCCATAGAGGTTCTTGTTGAGCTTGCTTCTCTTCAAACTTCGTTTTTGACTCTTGATGAGGCTATCAAGACTACAAACCGCAGGGTGAATGCCTTAGAGAATGTCGTGAAACCAAGGCTGGAAAACACAATTACTTACATCAAGGGTGAGTTGGATGAGCTGGAAAGGGAAGACTTTTTCCGGTTGAAGAAGATACAGGGTTATAAGAGAAAGGAGATCGAGAAACAGGTTGCGGCTGCCAAGCTGTTTGCTGAGGAACAGTTTGCAGAGAAGGTTTCCCTGCAAAGGGGGATATCAGTTAATGCAGCTCAAAATTTGTTGACTGCCACATCACAGAAGGATGAAGACATTATCTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50506.p1 GENE.R_Transcript_50506~~R_Transcript_50506.p1 ORF type:5prime_partial len:249 (+),score=73.05,ATP-synt_D|PF01813.13|6.7e-72 R_Transcript_50506:1-747(+)
VTMLGVMKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDVMKTSSFSLTEAKYVAGENVKHVVLENVKSASLKVRSRQENVAGVKLPKFEHFSEGETKNDLTGLARGGQQVQQCRTAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTITYIKGELDELEREDFFRLKKIQGYKRKEIEKQVAAAKLFAEEQFAEKVSLQRGISVNAAQNLLTATSQKDEDIIF*

Click here to download the sequence:
Link to NCBI Protein BLAST