Transcript Information: R_Transcript_5051.p1


Annotated TAIR IDAT3G02540.1
Annotated Gene NameRad23 UV excision repair protein family
Annotated Gene Symbol(s)RAD23-3, RAD23C
Annotation TypeHomolog
Chromosome Positionchr3:533095-536151 | Reverse length=419
E-Value1E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.528527923346
Replicate 211.489954060256
Replicate 314.61784680824
Condition 2: 8 Hour
Replicate 113.094045426334
Replicate 217.737241389176
Replicate 318.734015239223
Condition 3: 24 Hour
Replicate 117.96520030831
Replicate 214.860762674934
Replicate 316.815687558026


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5051.p1 GENE.R_Transcript_5051~~R_Transcript_5051.p1 ORF type:5prime_partial len:561 (+),score=143.92,UBA|PF00627.27|1.3e-13,UBA|PF00627.27|1.1e+04,UBA|PF00627.27|2.7e-13,XPC-binding|PF09280.7|8.4e-22,ubiquitin|PF00240.19|1.2e-17,Rad60-SLD|PF11976.4|2.4e-06 R_Transcript_5051:3-1685(+)
AAACCACTTCAAATGGATAATTTGAATGGAATTGGACTACAAGGTGGTTACAACTTACAAGTTACAAGTTGCAACCTTCAAGTATGGAGCACTCGACACGATACGATGCCGTATGAGTATCGCCCTAGCCTTAGCTCACCTCCTTTCAGGGCGCGTGAACGTCACCCCTCGGTGGATCCCTTACTTAGGCAAAGAGTTTTCACTCTTTCCAAGTATAAAACCCACAATTTAAACCTCCCTCTCCATTTTTCTCTCTCCTTTAGGTTTCAGCGAACAAGATTTTTCAGAGCGAATAATAAGATGAAGATTTTCGTAAAAACCCTGAAAGGAAGTCACTTCAACATTGAAGTAAATCCTCAAGATACGGTTGCTGATGTGAAGAAAAACATTGAAACTGTGCAAGGAGCAAATGTCTATCCTGCTTCACAACAGATGCTTATTCACCAGGGAAAGGTTCTCAAAGATGACACTACATTGGAAGAAAACAAAGTTGCTGAAAATAGTTTTATTGTTATTATGCTGACGAAGATCAAGGGTTCATCTGCAGAGGGATCCAAACCAGCAACAGCAGCAGTAGCTACACCCACATCCCAGGGCAAGAGCTCTGGGGAGGGTTCAACTGCAGCATCAGCAGCAACAACAGCAATGCCAACATCCCAGCTTTATCAGGGCAAGAGCTCTGGGGAGGGGTCAACTGCAGCATCAGCAGCAACAACAGCTATGCCAACATCCCAGGGCAAGAGCTCTGGGGAGGGTTCAACTGCAGCATCAGCAGCAACAACAGCTATGCCAACATCCCAGGTTCCTCCTGCAATGGCCTCGCCTACTTCAGTCTCAGAATTTGCAACGCCTCCAGCTCCTGTGGCTAATGCACCTCCCCCTACATCTGTGCCTGTATCATCTCCAGCTCCAGTAATTTCATCTGCCATGTCAGAATCTGATGTTGATGGTCAGGCAGCTTCCAATCTTCTAGCTGGAAGTAACCTGGAGCCTACAATTCAAGAAATTCTTGATATGGGTGGAGGGACATGGGACAGGGACACCGTTGTACGTGCCCTTCGTGCTGCATATAACAATCCAGAAAGAGCTGTTGATTATCTGTACTCGGGTATTCCTGAACAAGCTGACGTACCACTTGCAAGTCAATCCACTGGAGGTGGGCAAACTACAAATGCTACATCCGTGCCTCAACAGCCAACACAAGCAGCATCTGTGCCTTCTAGTGGGCCAAATGCAAATCCTTTAAATCTCTTTCCACAGGGTCTTCCCAATGTGGGCTCTGATGCTGCTCCAGCAGGTGCCTTGGATTTTTTGCGCAACAGTGAACAATTTCAAGCCTTGCGGGCCATGGTCCAAGCAAATCCCCAGGTTTTGCAGCCCATGCTTCAAGAGCTTGGAAAACAAAATCCTAATCTGGTCAGACTTATTCAAGAACATCAACCTGACTTTCTTCGGCTGATTAATGAACCTTTAGAAGGTGATGAAGGGGACATACTTGGGCATCTTGCTGATGCAATGCCTCAGTCTATAGAAGTTACACCGGAGGAGCATGAAGCCATAGAACGGCTTGAAGCTATGGGGTTTGACCGAGCAACTGTGTTGGAGGTTTACTTTGCCTGCAATAAAAATGAGGAGCTCGCAGCAAACTACCTTCTAGACCATATGAATGACCTTGAAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5051.p1 GENE.R_Transcript_5051~~R_Transcript_5051.p1 ORF type:5prime_partial len:561 (+),score=143.92,UBA|PF00627.27|1.3e-13,UBA|PF00627.27|1.1e+04,UBA|PF00627.27|2.7e-13,XPC-binding|PF09280.7|8.4e-22,ubiquitin|PF00240.19|1.2e-17,Rad60-SLD|PF11976.4|2.4e-06 R_Transcript_5051:3-1685(+)
KPLQMDNLNGIGLQGGYNLQVTSCNLQVWSTRHDTMPYEYRPSLSSPPFRARERHPSVDPLLRQRVFTLSKYKTHNLNLPLHFSLSFRFQRTRFFRANNKMKIFVKTLKGSHFNIEVNPQDTVADVKKNIETVQGANVYPASQQMLIHQGKVLKDDTTLEENKVAENSFIVIMLTKIKGSSAEGSKPATAAVATPTSQGKSSGEGSTAASAATTAMPTSQLYQGKSSGEGSTAASAATTAMPTSQGKSSGEGSTAASAATTAMPTSQVPPAMASPTSVSEFATPPAPVANAPPPTSVPVSSPAPVISSAMSESDVDGQAASNLLAGSNLEPTIQEILDMGGGTWDRDTVVRALRAAYNNPERAVDYLYSGIPEQADVPLASQSTGGGQTTNATSVPQQPTQAASVPSSGPNANPLNLFPQGLPNVGSDAAPAGALDFLRNSEQFQALRAMVQANPQVLQPMLQELGKQNPNLVRLIQEHQPDFLRLINEPLEGDEGDILGHLADAMPQSIEVTPEEHEAIERLEAMGFDRATVLEVYFACNKNEELAANYLLDHMNDLED*

Click here to download the sequence:
Link to NCBI Protein BLAST