Transcript Information: R_Transcript_5054.p1


Annotated TAIR IDAT1G16190.1
Annotated Gene NameRad23 UV excision repair protein family
Annotated Gene Symbol(s)RAD23A
Annotation TypeOrtholog
Chromosome Positionchr1:5543267-5545892 | Forward length=368
E-Value2E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.694728483545
Replicate 214.129089377885
Replicate 313.175679895531
Condition 2: 8 Hour
Replicate 111.046254863419
Replicate 213.36609102537
Replicate 313.374870983443
Condition 3: 24 Hour
Replicate 116.139511096168
Replicate 211.608030995041
Replicate 313.576959674203


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5054.p1 GENE.R_Transcript_5054~~R_Transcript_5054.p1 ORF type:complete len:266 (+),score=70.09,XPC-binding|PF09280.7|2.8e-18,ubiquitin|PF00240.19|3.7e-18,UBA|PF00627.27|3.6e+03,UBA|PF00627.27|1e-13,Rad60-SLD|PF11976.4|7.1e-07 R_Transcript_5054:302-1099(+)
ATGAAGATTTTCGTAAAAACCCTGAAAGGAAGTCACTTCAACATTGAAGTAAATCCTCAAGATACGGTTGCTGATGTGAAGAAAAACATTGAAACTGTGCAAGGAGCAAATGTCTATCCTGCTTCACAACAGATGCTTATTCACCAGGGAAAGGTTCTCAAAGATGACACTACATTGGAAGAAAACAAAGTTGCTGAAAATAGTTTTATTGTTATTATGCTGACGAAGATCAAGGGTTCATCTGCAGAGGGATCAAAACCAGCAGCAGCAGTAGCTTCACCCACATCCCAGGGCAAGAGCTCTGGGGAGGGTTCAGCTGCAGATACAGCAGCAACAACAGCTACACCTACATCCCAGGTTCCTCCCACAATGGCCTCGCCTGCTTCAGTCCCAGAATCTGCAACGCCTCTATTTTTTCTGTTCTTTTGCCCTCTATTTTTTCAGTTTCAAGCCTTGCGGGCCATGGTCCAAGCAAATCCCCAGGTTTTGCAGCCCATGCTTCAAGAGCTTGGAAAACAAAATCCTAATCTGGTCAGACTTATTCAAGAACATCAACCTGACTTTCTTCGGCTGATTAATGAACCTTTAGAAGGTGATGAAGGGGACATACTTGGGCATCTTGCTGATGCAATGCCTCAGTCTATAGAAGTTACACCGGAGGAGCATGAAGCCATAGAACGGCTTGAAGCTATGGGGTTTGACCGAGCAACTGTGTTGGAGGTTTACTTTGCCTGCAATAAAAATGAGGAGCTCGCAGCAAACTACCTTCTAGACCATATGAATGACTTTGAAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5054.p1 GENE.R_Transcript_5054~~R_Transcript_5054.p1 ORF type:complete len:266 (+),score=70.09,XPC-binding|PF09280.7|2.8e-18,ubiquitin|PF00240.19|3.7e-18,UBA|PF00627.27|3.6e+03,UBA|PF00627.27|1e-13,Rad60-SLD|PF11976.4|7.1e-07 R_Transcript_5054:302-1099(+)
MKIFVKTLKGSHFNIEVNPQDTVADVKKNIETVQGANVYPASQQMLIHQGKVLKDDTTLEENKVAENSFIVIMLTKIKGSSAEGSKPAAAVASPTSQGKSSGEGSAADTAATTATPTSQVPPTMASPASVPESATPLFFLFFCPLFFQFQALRAMVQANPQVLQPMLQELGKQNPNLVRLIQEHQPDFLRLINEPLEGDEGDILGHLADAMPQSIEVTPEEHEAIERLEAMGFDRATVLEVYFACNKNEELAANYLLDHMNDFED*

Click here to download the sequence:
Link to NCBI Protein BLAST